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Protein

Uncharacterized symporter YagG

Gene

yagG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Symport, Transport

Enzyme and pathway databases

BioCyciEcoCyc:B0270-MONOMER.
ECOL316407:JW0263-MONOMER.

Protein family/group databases

TCDBi2.A.2.3.5. the glycoside-pentoside-hexuronide (gph):cation symporter family.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized symporter YagG
Gene namesi
Name:yagG
Ordered Locus Names:b0270, JW0263
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13346. yagG.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei10 – 3021HelicalSequence analysisAdd
BLAST
Transmembranei31 – 5121HelicalSequence analysisAdd
BLAST
Transmembranei79 – 9921HelicalSequence analysisAdd
BLAST
Transmembranei107 – 12721HelicalSequence analysisAdd
BLAST
Transmembranei151 – 17121HelicalSequence analysisAdd
BLAST
Transmembranei180 – 20021HelicalSequence analysisAdd
BLAST
Transmembranei263 – 28321HelicalSequence analysisAdd
BLAST
Transmembranei309 – 32921HelicalSequence analysisAdd
BLAST
Transmembranei367 – 38721HelicalSequence analysisAdd
BLAST
Transmembranei406 – 42621HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 460460Uncharacterized symporter YagGPRO_0000170765Add
BLAST

Proteomic databases

PaxDbiP75683.

Interactioni

Protein-protein interaction databases

BioGridi4261987. 188 interactions.
DIPiDIP-11234N.
IntActiP75683. 2 interactions.
MINTiMINT-1263876.
STRINGi511145.b0270.

Structurei

3D structure databases

ProteinModelPortaliP75683.
SMRiP75683. Positions 4-426.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105CT4. Bacteria.
COG2211. LUCA.
HOGENOMiHOG000222022.
InParanoidiP75683.
OMAiCTLTFYT.
OrthoDBiEOG6JX7K1.
PhylomeDBiP75683.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR001927. Na/Gal_symport.
IPR018043. Na/Gal_symport_CS.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
TIGRFAMsiTIGR00792. gph. 1 hit.
PROSITEiPS00872. NA_GALACTOSIDE_SYMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P75683-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQLTMKDKI GYGLGDTACG FVWQATMFLL AYFYTDVFGL SAGIMGTLFL
60 70 80 90 100
VSRVLDAVTD PLMGLLVDRT RTRHGQFRPF LLWGAIPFGI VCVLTFYTPD
110 120 130 140 150
FSAQGKIIYA CVTYILLTLV YTFVNVPYCA MPGVITADPK ERHALQSWRF
160 170 180 190 200
FLAAAGSLAI SGIALPLVSI IGKGDEQVGY FGAMCVLGLS GVVLLYVCFF
210 220 230 240 250
TTKERYTFEV QPGSSVAKDL KLLLGNSQWR IMCAFKMMAT CSNVVRGGAT
260 270 280 290 300
LYFVKYVMDH PELATQFLLY GSLATMFGSL CSSRLLGRFD RVTAFKWIIV
310 320 330 340 350
AYSLISLLIF VTPAEHIALI FALNILFLFV FNTTTPLQWL MASDVVDYEE
360 370 380 390 400
SRSGRRLDGL VFSTYLFSLK IGLAIGGAVV GWILAYVNYS ASSSVQPVEV
410 420 430 440 450
LTTIKILFCV VPVVLYAGMF IMLSLYKLTD ARVEAISRQL IKHRAAQGEA
460
VPDAATAASH
Length:460
Mass (Da):50,632
Last modified:February 1, 1997 - v1
Checksum:iAB600588E663C6B7
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti370 – 3701K → N in AAB08691 (Ref. 1) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA. Translation: AAB08691.1.
U00096 Genomic DNA. Translation: AAC73373.1.
AP009048 Genomic DNA. Translation: BAE76054.1.
PIRiF64752.
RefSeqiNP_414804.1. NC_000913.3.
WP_000192863.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73373; AAC73373; b0270.
BAE76054; BAE76054; BAE76054.
GeneIDi944947.
KEGGiecj:JW0263.
eco:b0270.
PATRICi32115661. VBIEscCol129921_0274.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA. Translation: AAB08691.1.
U00096 Genomic DNA. Translation: AAC73373.1.
AP009048 Genomic DNA. Translation: BAE76054.1.
PIRiF64752.
RefSeqiNP_414804.1. NC_000913.3.
WP_000192863.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP75683.
SMRiP75683. Positions 4-426.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261987. 188 interactions.
DIPiDIP-11234N.
IntActiP75683. 2 interactions.
MINTiMINT-1263876.
STRINGi511145.b0270.

Protein family/group databases

TCDBi2.A.2.3.5. the glycoside-pentoside-hexuronide (gph):cation symporter family.

Proteomic databases

PaxDbiP75683.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73373; AAC73373; b0270.
BAE76054; BAE76054; BAE76054.
GeneIDi944947.
KEGGiecj:JW0263.
eco:b0270.
PATRICi32115661. VBIEscCol129921_0274.

Organism-specific databases

EchoBASEiEB3130.
EcoGeneiEG13346. yagG.

Phylogenomic databases

eggNOGiENOG4105CT4. Bacteria.
COG2211. LUCA.
HOGENOMiHOG000222022.
InParanoidiP75683.
OMAiCTLTFYT.
OrthoDBiEOG6JX7K1.
PhylomeDBiP75683.

Enzyme and pathway databases

BioCyciEcoCyc:B0270-MONOMER.
ECOL316407:JW0263-MONOMER.

Miscellaneous databases

PROiP75683.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR001927. Na/Gal_symport.
IPR018043. Na/Gal_symport_CS.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
TIGRFAMsiTIGR00792. gph. 1 hit.
PROSITEiPS00872. NA_GALACTOSIDE_SYMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence of minutes 4-25 of Escherichia coli."
    Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.
    Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYAGG_ECOLI
AccessioniPrimary (citable) accession number: P75683
Secondary accession number(s): P71292, Q2MCF2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 122 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.