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Protein
Submitted name:

-derived mitogen typeB

Gene

ypmB

Organism
Yersinia pseudotuberculosis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
-derived mitogen typeBImported
Submitted name:
Superantigen YPMbImported
Submitted name:
Superantigen YpmAImported
Gene namesi
Name:ypmBImported
Synonyms:ypmAImported
ORF Names:ERS008566_00032Imported
OrganismiYersinia pseudotuberculosisImported
Taxonomic identifieri633 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
Proteomesi
  • UP000042016 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 150130Sequence analysisPRO_5007318002Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.120.510. 1 hit.
InterProiIPR015227. Mitogen_YERPS.
[Graphical view]
PfamiPF09144. YpM. 1 hit.
[Graphical view]
SUPFAMiSSF101606. SSF101606. 1 hit.

Sequencei

Sequence statusi: Complete.

P74990-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKKFLSLLT LTFFSGLALA ADYDNTLNSI PSLRIPNIET YTGTIQGKGE
60 70 80 90 100
VCIRGNKEGK SRGGELYAVL RSTNANADMT LILLCSIRDG WKEVKRSDID
110 120 130 140 150
RPLRYEDYYT PGALSWIWEI KNNSSEASDY SLSATVHDDK EDSDVLMKCP
Length:150
Mass (Da):16,808
Last modified:February 1, 1997 - v1
Checksum:iAC84E0A0E91EFC0A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF418982 Genomic DNA. Translation: AAL14967.1.
D88144 Genomic DNA. Translation: BAA13543.1.
CPZI01000001 Genomic DNA. Translation: CNE94002.1.
RefSeqiWP_025383934.1. NZ_CPZI01000001.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF418982 Genomic DNA. Translation: AAL14967.1.
D88144 Genomic DNA. Translation: BAA13543.1.
CPZI01000001 Genomic DNA. Translation: CNE94002.1.
RefSeqiWP_025383934.1. NZ_CPZI01000001.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.510. 1 hit.
InterProiIPR015227. Mitogen_YERPS.
[Graphical view]
PfamiPF09144. YpM. 1 hit.
[Graphical view]
SUPFAMiSSF101606. SSF101606. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Purification, characterization and cloning of a novel variant of the superantigen Yersinia pseudotuberculosis-derived mitogen."
    Ramamurthy T., Yoshino K., Abe J., Ikeda N., Takeda T.
    FEBS Lett. 413:174-176(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: R-104Imported.
  2. "The superantigen gene ypm is located in an unstable chromosomal locus of Yersinia pseudotuberculosis."
    Carnoy C., Floquet S., Marceau M., Sebbane F., Haentjens-Herwegh S., Devalckenaere A., Simonet M.
    J. Bacteriol. 184:4489-4499(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 487/90Imported.
  3. Murphy D.
    Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: R819Imported.

Entry informationi

Entry nameiP74990_YERPU
AccessioniPrimary (citable) accession number: P74990
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: June 8, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.