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Protein

Beta-xylanase

Gene

xyla

Organism
Thermobifida alba
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiCBM2. Carbohydrate-Binding Module Family 2.
GH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:xylaImported
OrganismiThermobifida albaImported
Taxonomic identifieri53522 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptosporangialesNocardiopsaceaeThermobifida

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3838Sequence analysisAdd
BLAST
Chaini39 – 482444Beta-xylanaseSequence analysisPRO_5004161322Add
BLAST

Keywords - PTMi

Disulfide bondUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliP74912.
SMRiP74912. Positions 40-353.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini36 – 352317GH10 (glycosyl hydrolase family 10)InterPro annotationAdd
BLAST
Domaini375 – 482108CBM2 (carbohydrate binding type-2)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation
Contains 1 CBM2 (carbohydrate binding type-2) domain.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.40.290. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR008965. Carb-bd_dom.
IPR001919. CBD2.
IPR012291. CBD_carb-bd_dom.
IPR018366. CBM2_CS.
IPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00553. CBM_2. 1 hit.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00637. CBD_II. 1 hit.
SM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49384. SSF49384. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51173. CBM2. 1 hit.
PS00561. CBM2_A. 1 hit.
PS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P74912-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTETRHRPSR RARRSLSLLL TSALTAAGLL VTAAPAQAES TLRELAAQNG
60 70 80 90 100
GRHFGTAIAY SPLNSDAQYR NIAATQFSAI THENEMKWES LEPQRGQYNW
110 120 130 140 150
SQADNIINFA KANNQIVRGH TLVWHSQLPS WLNNGGFSGS QLRSIMENHI
160 170 180 190 200
EVVAGRYRGD VYAWDVVNEA FNEDGTLRDS IWYRGMGRDY IAHAFRKAHE
210 220 230 240 250
VDPDAKLYIN DYNIEGINAK SNGLYNLVVD LLRDGVPIHG IGIQSHLIVG
260 270 280 290 300
QVPSTFQQNI QRFADLGLDV AITELDIRMQ MPADQYKLQQ QARDYEAVVN
310 320 330 340 350
ACLAVTRCIG ITVWGIDDER SWVPYTFPGE GAPLLYDGQY NRKPAWYAVY
360 370 380 390 400
EALGGDSSGG GPGEPGGPGG PGEPGGPGDG TCAVNYTVVN DWGHGMQGAI
410 420 430 440 450
TVSNTGSSPI NNWTLQFSFS GVNISNGWNG EWSQSGSQIT VRAPAWNSTL
460 470 480
QPGQSVELGF VADKTGNVSP PSQFTLNGAT CS
Length:482
Mass (Da):52,479
Last modified:February 1, 1997 - v1
Checksum:i76378A4D1B95B94C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z81013 Genomic DNA. Translation: CAB02654.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z81013 Genomic DNA. Translation: CAB02654.1.

3D structure databases

ProteinModelPortaliP74912.
SMRiP74912. Positions 40-353.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM2. Carbohydrate-Binding Module Family 2.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.40.290. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR008965. Carb-bd_dom.
IPR001919. CBD2.
IPR012291. CBD_carb-bd_dom.
IPR018366. CBM2_CS.
IPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00553. CBM_2. 1 hit.
PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00637. CBD_II. 1 hit.
SM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49384. SSF49384. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51173. CBM2. 1 hit.
PS00561. CBM2_A. 1 hit.
PS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Cloning, expression in Streptomyces lividans and biochemical characterization of a thermostable endo-beta-1,4-xylanase of Thermomonospora alba ULJB1 with cellulose-binding ability."
    Blanco J., Coque J., Martin J.
    Appl. Microbiol. Biotechnol. 48:208-217(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ULJB1Imported.

Entry informationi

Entry nameiP74912_9ACTN
AccessioniPrimary (citable) accession number: P74912
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: April 13, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.