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P74707

- RF1_SYNY3

UniProt

P74707 - RF1_SYNY3

Protein

Peptide chain release factor 1

Gene

prfA

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 96 (01 Oct 2014)
      Sequence version 1 (01 Feb 1997)
      Previous versions | rss
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    Functioni

    Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.By similarity

    GO - Molecular functioni

    1. translation release factor activity, codon specific Source: UniProtKB-HAMAP

    Keywords - Biological processi

    Protein biosynthesis

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Peptide chain release factor 1
    Short name:
    RF-1
    Gene namesi
    Name:prfA
    Ordered Locus Names:sll1110
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Subcellular locationi

    Cytoplasm By similarity

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 365365Peptide chain release factor 1PRO_0000177760Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei239 – 2391N5-methylglutamineBy similarity

    Post-translational modificationi

    Methylated by PrmC. Methylation increases the termination efficiency of RF1 By similarity.By similarity

    Keywords - PTMi

    Methylation

    Proteomic databases

    PaxDbiP74707.

    Interactioni

    Protein-protein interaction databases

    IntActiP74707. 2 interactions.
    STRINGi1148.sll1110.

    Structurei

    3D structure databases

    ProteinModelPortaliP74707.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0216.
    HOGENOMiHOG000074815.
    KOiK02835.
    OMAiKDSRVTD.
    OrthoDBiEOG6TN48J.
    PhylomeDBiP74707.

    Family and domain databases

    Gene3Di3.30.160.20. 1 hit.
    HAMAPiMF_00093. Rel_fac_1.
    InterProiIPR014720. dsRNA-bd_dom.
    IPR005139. PCRF.
    IPR000352. Pep_chain_release_fac_I_II.
    IPR004373. PrfA.
    [Graphical view]
    PfamiPF03462. PCRF. 1 hit.
    PF00472. RF-1. 1 hit.
    [Graphical view]
    SMARTiSM00937. PCRF. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00019. prfA. 1 hit.
    PROSITEiPS00745. RF_PROK_I. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P74707-1 [UniParc]FASTAAdd to Basket

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    MAETYLLDKL ASVEQTYQEL TRMLADPDIA TNPDELQRVA KARSSLEETV    50
    DTYETWKRSQ EDLKGARQIV KESGNDPEMR EMAQLEVEEL ENAIGELEKR 100
    LTILLLPKDP NDEKNIMLEI RAGTGGDEAS IWAGDLVRMY TRYAESQGWK 150
    VSLLSESLAD MGGFKEAILE VKGDRVYSQL KFEAGVHRVQ RVPVTEAGGR 200
    VHTSTATVAI MPEVDDVEVK IDPKDIEMST ARSGGAGGQN VNKVETAVDL 250
    FHKPTGIRIF CTEERSQLQN RERAMQILRA KLYDMMLQEQ NDAISSNRRS 300
    QVGTGSRSEK IRTYNYKDNR VTDHRLGRNF DLNTALEGEI HTIIESCISQ 350
    DQQERLAELA EATNN 365
    Length:365
    Mass (Da):41,126
    Last modified:February 1, 1997 - v1
    Checksum:iD565402A35E27EAC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA18826.1.
    PIRiS76914.
    RefSeqiNP_443014.1. NC_000911.1.
    YP_005653073.1. NC_017277.1.
    YP_007452889.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA18826; BAA18826; BAA18826.
    GeneIDi951907.
    KEGGisyn:sll1110.
    syy:SYNGTS_3120.
    syz:MYO_131560.
    PATRICi23843878. VBISynSp132158_3469.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA18826.1 .
    PIRi S76914.
    RefSeqi NP_443014.1. NC_000911.1.
    YP_005653073.1. NC_017277.1.
    YP_007452889.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali P74707.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P74707. 2 interactions.
    STRINGi 1148.sll1110.

    Proteomic databases

    PaxDbi P74707.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA18826 ; BAA18826 ; BAA18826 .
    GeneIDi 951907.
    KEGGi syn:sll1110.
    syy:SYNGTS_3120.
    syz:MYO_131560.
    PATRICi 23843878. VBISynSp132158_3469.

    Phylogenomic databases

    eggNOGi COG0216.
    HOGENOMi HOG000074815.
    KOi K02835.
    OMAi KDSRVTD.
    OrthoDBi EOG6TN48J.
    PhylomeDBi P74707.

    Family and domain databases

    Gene3Di 3.30.160.20. 1 hit.
    HAMAPi MF_00093. Rel_fac_1.
    InterProi IPR014720. dsRNA-bd_dom.
    IPR005139. PCRF.
    IPR000352. Pep_chain_release_fac_I_II.
    IPR004373. PrfA.
    [Graphical view ]
    Pfami PF03462. PCRF. 1 hit.
    PF00472. RF-1. 1 hit.
    [Graphical view ]
    SMARTi SM00937. PCRF. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00019. prfA. 1 hit.
    PROSITEi PS00745. RF_PROK_I. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiRF1_SYNY3
    AccessioniPrimary (citable) accession number: P74707
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: February 1, 1997
    Last modified: October 1, 2014
    This is version 96 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3