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P74707

- RF1_SYNY3

UniProt

P74707 - RF1_SYNY3

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Protein

Peptide chain release factor 1

Gene
prfA, sll1110
Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA By similarity.UniRule annotation

GO - Molecular functioni

  1. translation release factor activity, codon specific Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Biological processi

Protein biosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Peptide chain release factor 1
Short name:
RF-1
Gene namesi
Name:prfA
Ordered Locus Names:sll1110
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 365365Peptide chain release factor 1UniRule annotationPRO_0000177760Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei239 – 2391N5-methylglutamine By similarity

Post-translational modificationi

Methylated by PrmC. Methylation increases the termination efficiency of RF1 By similarity.UniRule annotation

Keywords - PTMi

Methylation

Proteomic databases

PaxDbiP74707.

Interactioni

Protein-protein interaction databases

IntActiP74707. 2 interactions.
STRINGi1148.sll1110.

Structurei

3D structure databases

ProteinModelPortaliP74707.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0216.
HOGENOMiHOG000074815.
KOiK02835.
OMAiKDSRVTD.
OrthoDBiEOG6TN48J.
PhylomeDBiP74707.

Family and domain databases

Gene3Di3.30.160.20. 1 hit.
HAMAPiMF_00093. Rel_fac_1.
InterProiIPR014720. dsRNA-bd_dom.
IPR005139. PCRF.
IPR000352. Pep_chain_release_fac_I_II.
IPR004373. PrfA.
[Graphical view]
PfamiPF03462. PCRF. 1 hit.
PF00472. RF-1. 1 hit.
[Graphical view]
SMARTiSM00937. PCRF. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00019. prfA. 1 hit.
PROSITEiPS00745. RF_PROK_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P74707-1 [UniParc]FASTAAdd to Basket

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MAETYLLDKL ASVEQTYQEL TRMLADPDIA TNPDELQRVA KARSSLEETV    50
DTYETWKRSQ EDLKGARQIV KESGNDPEMR EMAQLEVEEL ENAIGELEKR 100
LTILLLPKDP NDEKNIMLEI RAGTGGDEAS IWAGDLVRMY TRYAESQGWK 150
VSLLSESLAD MGGFKEAILE VKGDRVYSQL KFEAGVHRVQ RVPVTEAGGR 200
VHTSTATVAI MPEVDDVEVK IDPKDIEMST ARSGGAGGQN VNKVETAVDL 250
FHKPTGIRIF CTEERSQLQN RERAMQILRA KLYDMMLQEQ NDAISSNRRS 300
QVGTGSRSEK IRTYNYKDNR VTDHRLGRNF DLNTALEGEI HTIIESCISQ 350
DQQERLAELA EATNN 365
Length:365
Mass (Da):41,126
Last modified:February 1, 1997 - v1
Checksum:iD565402A35E27EAC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA18826.1.
PIRiS76914.
RefSeqiNP_443014.1. NC_000911.1.
YP_005653073.1. NC_017277.1.
YP_007452889.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA18826; BAA18826; BAA18826.
GeneIDi951907.
KEGGisyn:sll1110.
syy:SYNGTS_3120.
syz:MYO_131560.
PATRICi23843878. VBISynSp132158_3469.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA18826.1 .
PIRi S76914.
RefSeqi NP_443014.1. NC_000911.1.
YP_005653073.1. NC_017277.1.
YP_007452889.1. NC_020286.1.

3D structure databases

ProteinModelPortali P74707.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P74707. 2 interactions.
STRINGi 1148.sll1110.

Proteomic databases

PaxDbi P74707.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA18826 ; BAA18826 ; BAA18826 .
GeneIDi 951907.
KEGGi syn:sll1110.
syy:SYNGTS_3120.
syz:MYO_131560.
PATRICi 23843878. VBISynSp132158_3469.

Phylogenomic databases

eggNOGi COG0216.
HOGENOMi HOG000074815.
KOi K02835.
OMAi KDSRVTD.
OrthoDBi EOG6TN48J.
PhylomeDBi P74707.

Family and domain databases

Gene3Di 3.30.160.20. 1 hit.
HAMAPi MF_00093. Rel_fac_1.
InterProi IPR014720. dsRNA-bd_dom.
IPR005139. PCRF.
IPR000352. Pep_chain_release_fac_I_II.
IPR004373. PrfA.
[Graphical view ]
Pfami PF03462. PCRF. 1 hit.
PF00472. RF-1. 1 hit.
[Graphical view ]
SMARTi SM00937. PCRF. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00019. prfA. 1 hit.
PROSITEi PS00745. RF_PROK_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiRF1_SYNY3
AccessioniPrimary (citable) accession number: P74707
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: July 9, 2014
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi