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Protein
Submitted name:

Antiviral protein

Gene

ski2

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. helicase activity Source: UniProtKB-KW
  3. nucleic acid binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HelicaseUniRule annotation, Hydrolase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Antiviral proteinImported
Gene namesi
Name:ski2Imported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Interactioni

Protein-protein interaction databases

DIPiDIP-48814N.
IntActiP74686. 9 interactions.
STRINGi1148.slr0451.

Structurei

3D structure databases

ProteinModelPortaliP74686.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4581.
HOGENOMiHOG000245391.
InParanoidiP74686.
OMAiDNELWLG.
PhylomeDBiP74686.

Family and domain databases

Gene3Di3.40.50.300. 3 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR012961. DSH_C.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF08148. DSHCT. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 3 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P74686-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTLAYANPA DLFAFPLDDF QQEAIAALDQ DQSVVVCAPT GSGKTVVGEY
60 70 80 90 100
AIYRAIARGK RVFYTTPLKA LSNQKIRDFQ EKLEKLGLEN AAQLVGLITG
110 120 130 140 150
DTVINADAPV VVMTTEIFRN MLYETPIGEV GTSLEDVETV VFDEVHYISD
160 170 180 190 200
RGRGTVWEES IIYCPSTIQL VGLSATIGNP EQLTEWINQV RTGVSLKVLR
210 220 230 240 250
QGEQRNDSPP CVLVNSDFRP VPLTFHYSTR KGLFPLLNEK KTGVNTRLLP
260 270 280 290 300
KAGNKNTRSG KNRRMRREDC PYPLLVMQQL QERNLLPVIY VIFSRRGCEQ
310 320 330 340 350
AAQSLEDLSL VEPAEQESIQ LQLLDFFFGK NPLLRQKLER DLANGLPDLV
360 370 380 390 400
QAVVAYLDHP QDSEAAQRLL TALAIDPEGM FKLWGWIAQS SPMTRFEQIE
410 420 430 440 450
PLLRGIAVHH AGILPDMKTL VEKLFEQGLI KVVFATATLS AGINMPARTT
460 470 480 490 500
VISALSKRTN EGHAMLSPSE FLQIAGRAGR RGMDTEGHVI TVQTPFEGAN
510 520 530 540 550
EASYLALAEA EPLKSWFTPS YGMVLNLLQK HDLEEVKSLL ERSFAEYLAQ
560 570 580 590 600
FALEPTKVAI AETVKKLSQL DIKLAGIGEK DLRSYEKFRG RLREEQRLLK
610 620 630 640 650
ILEEQAEKER KQQLKDQLKT LAPGQLLYLK GRHVKIHQPR LAVIVAPLAP
660 670 680 690 700
AHNLPQWCCL GSDNRWYHVT VGDIYAVPIG NLSPAQWQHL TPPPAELLAP
710 720 730 740 750
GKSVKGDEET LAIAAGLDPQ TYPLEPSPEL VEQQARVDHV EKLLAVHPLA
760 770 780 790 800
SQKHPGKLLE QFHQRQELRK TLSKRQQEYD RLQSRQSYYW QEFLDLIDIL
810 820 830 840 850
QEMEALEEYT PTLLGEVAAT LRGENELWLG LALISGKFND LEPEQLAAAA
860 870 880 890 900
SALITETPRS DAWTDFKPSP VVLAALRPSN DLFGLLFCLK HPQPPLALWQ
910 920 930 940 950
AMTVADHLQR LNLWDLRRKL IKAQNQRAIA IPLWLEVDFM GLVEQWALGM
960 970 980 990 1000
EWENLCRQTS LDEGDLVRLF RRTVDLLWQI PQVPHLSPRL KRNARIAVQQ

MKRFPL
Length:1,006
Mass (Da):113,385
Last modified:February 1, 1997 - v1
Checksum:iA0B3C5CEA2319C12
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18804.1.
PIRiS76892.
RefSeqiNP_442992.1. NC_000911.1.
YP_005653051.1. NC_017277.1.
YP_007452867.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA18804; BAA18804; BAA18804.
GeneIDi951924.
KEGGisyn:slr0451.
PATRICi23843828. VBISynSp132158_3444.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18804.1.
PIRiS76892.
RefSeqiNP_442992.1. NC_000911.1.
YP_005653051.1. NC_017277.1.
YP_007452867.1. NC_020286.1.

3D structure databases

ProteinModelPortaliP74686.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-48814N.
IntActiP74686. 9 interactions.
STRINGi1148.slr0451.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA18804; BAA18804; BAA18804.
GeneIDi951924.
KEGGisyn:slr0451.
PATRICi23843828. VBISynSp132158_3444.

Phylogenomic databases

eggNOGiCOG4581.
HOGENOMiHOG000245391.
InParanoidiP74686.
OMAiDNELWLG.
PhylomeDBiP74686.

Family and domain databases

Gene3Di3.40.50.300. 3 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR012961. DSH_C.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF08148. DSHCT. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 3 hits.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / KazusaImported.

Entry informationi

Entry nameiP74686_SYNY3
AccessioniPrimary (citable) accession number: P74686
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: January 7, 2015
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.