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P74598 (Y1491_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 87. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uncharacterized WD repeat-containing protein sll1491
Gene names
Ordered Locus Names:sll1491
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechocystis ›

Protein attributes

Sequence length348 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 6 WD repeats.

Ontologies

Keywords
   DomainRepeat
WD repeat
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentouter membrane-bounded periplasmic space

Inferred from direct assay PubMed 10998049. Source: UniProtKB

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 348348Uncharacterized WD repeat-containing protein sll1491
PRO_0000051520

Regions

Repeat59 – 9840WD 1
Repeat142 – 18241WD 2
Repeat185 – 22642WD 3
Repeat229 – 26739WD 4
Repeat270 – 30940WD 5
Repeat312 – 34736WD 6

Sequences

Sequence LengthMass (Da)Tools
P74598 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: D7399CC43E37466F

FASTA34837,347
        10         20         30         40         50         60 
MNNYFPRLKQ FSAPATFFLT VACLVYPGEN AHANASTPNP YTVAQTTASP SVAVENLSGF 

        70         80         90        100        110        120 
QGIITALNIT PDGKYLAVAT ADNQITLIDL ANQEVVYSQR SPVNNFADLA ISADGQWLAI 

       130        140        150        160        170        180 
AADNNVDVRR VRDGMRVETL VGHTDKVSGV AFSPDGETIV SVSGGDRTIR IWERASGNLI 

       190        200        210        220        230        240 
QTLADNLGPT TSVVFTPDGS QFITGAIGQD RTIKFWDANT FELLGTSPQQ PGFINGLAVT 

       250        260        270        280        290        300 
PDGRKLVGAV RNFVKAWNLA DAKELFSVRG PSLEINTIAV SPNNRWVATA NKEGTIMIFD 

       310        320        330        340 
LANGKQVTTL RGHQGWVLSL AFSPDGNTLY SGAEDKTVKI WDLSALAR

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References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000022 Genomic DNA. Translation: BAA18706.1.
PIRS76794.
RefSeqNP_442894.1. NC_000911.1.
YP_005652955.1. NC_017277.1.
YP_007452770.1. NC_020286.1.

3D structure databases

ProteinModelPortalP74598.
ModBaseSearch...

Protein-protein interaction databases

IntActP74598. 1 interaction.
STRING1148.sll1491.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA18706; BAA18706; BAA18706.
GeneID12255406.
14618462.
952007.
KEGGsyn:sll1491.
syy:SYNGTS_3002.
PATRIC23843592. VBISynSp132158_3326.

Phylogenomic databases

eggNOGCOG2319.
OMAKMPEQTI.
ProtClustDBCLSK2301952.

Family and domain databases

Gene3D2.130.10.10. 2 hits.
InterProIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamPF00400. WD40. 5 hits.
[Graphical view]
SMARTSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMSSF50978. WD40_like. 1 hit.
PROSITEPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY1491_SYNY3
AccessionPrimary (citable) accession number: P74598
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: May 1, 2013
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families

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