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P74595 (P74595_SYNY3) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 101. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:rpoF EMBL BAA18703.1
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length258 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
P74595 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 77D648140540BBEB

FASTA25829,523
        10         20         30         40         50         60 
MTNATSESLK LETLRLFKIY AESHDIGVRN RIMEVNLGLV RKEAHHWTAQ CNESFEDLSQ 

        70         80         90        100        110        120 
VGCLGLIRAI ERFDVSKGNA FSSFAIPYVR GEIQHFLRDK SNCVRIPRRW LDLGRQAIAV 

       130        140        150        160        170        180 
QQEFRLKYDR AATDEEIAQI LAVPLADWQE TKLALQNREL VSLDTKVNGD DEGQVNLGDC 

       190        200        210        220        230        240 
LAHHEFRSFQ LSQEDQIRLQ QALAGLEERT RRIVEFVFLH DFTHKEAAEM MGVSVITVSR 

       250 
RIKQGIGALK KALNTEIF 

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References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA18703.1.
PIRS76791.
RefSeqNP_442891.1. NC_000911.1.
YP_005652952.1. NC_017277.1.

3D structure databases

ProteinModelPortalP74595.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP74595. 3 interactions.
STRING1148.slr1564.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA18703; BAA18703; BAA18703.
GeneID12255323.
952275.
KEGGsyn:slr1564.
syy:SYNGTS_2999.
PATRIC23843584. VBISynSp132158_3322.

Phylogenomic databases

eggNOGCOG1191.
HOGENOMHOG000270270.
KOK03090.
OMADTTWAVH.
PhylomeDBP74595.
ProtClustDBPRK07408.

Family and domain databases

Gene3D1.10.10.10. 2 hits.
InterProIPR014284. RNA_pol_sigma-70_dom.
IPR007627. RNA_pol_sigma70_r2.
IPR007630. RNA_pol_sigma70_r4.
IPR013325. RNA_pol_sigma_r2.
IPR013324. RNA_pol_sigma_r3_r4.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF04542. Sigma70_r2. 1 hit.
PF04545. Sigma70_r4. 1 hit.
[Graphical view]
SUPFAMSSF88659. SSF88659. 2 hits.
SSF88946. SSF88946. 1 hit.
TIGRFAMsTIGR02937. sigma70-ECF. 1 hit.
ProtoNetSearch...

Entry information

Entry nameP74595_SYNY3
AccessionPrimary (citable) accession number: P74595
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: April 16, 2014
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)