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P74511 (Y1949_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Thylakoid membrane protein slr1949
Gene names
Ordered Locus Names:slr1949
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length212 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 212212Thylakoid membrane protein slr1949
PRO_0000352743

Regions

Transmembrane109 – 13123Helical; Potential
Coiled coil180 – 21233 Potential
Compositional bias114 – 1229Poly-Leu

Sequences

Sequence LengthMass (Da)Tools
P74511 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 777F6D5786B83623

FASTA21223,883
        10         20         30         40         50         60 
MTSYSSATAR AEMSELRRLK SLLPPELQSW VMVEGSTEVN PPLIRSEELG RDEIEIQVDL 

        70         80         90        100        110        120 
AKWENLAIDQ RNLLFWHEVA RIQSDTIPRE GWEMAALAIG LGGAVGELWV QDGLLLLLAL 

       130        140        150        160        170        180 
GLCGISGYRL WQKNNGEKRI KEAIEADEKA ITLATRFGYT LPNAYKSLGS AFKTLIEQTP 

       190        200        210 
NRRQRKQYET RLQALRQSAA KMKAKTQKAK AL 

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References

« Hide 'large scale' references
[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.
[2]"Proteomic studies of the thylakoid membrane of Synechocystis sp. PCC 6803."
Srivastava R., Pisareva T., Norling B.
Proteomics 5:4905-4916(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBCELLULAR LOCATION IN THYLAKOID.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA18615.1.
PIRS76486.
RefSeqNP_441937.1. NC_000911.1.
YP_005651997.1. NC_017277.1.
YP_007451817.1. NC_020286.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING1148.slr1949.

Proteomic databases

PaxDbP74511.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA18615; BAA18615; BAA18615.
GeneID12254657.
14617485.
954913.
KEGGsyn:slr1949.
syy:SYNGTS_2044.
syz:MYO_120630.
PATRIC23841422. VBISynSp132158_2260.

Phylogenomic databases

eggNOGNOG84194.
OMAQSWVFVE.
OrthoDBEOG6GFGKD.
ProtClustDBCLSK893342.

Family and domain databases

InterProIPR021751. DUF3318.
[Graphical view]
PfamPF11780. DUF3318. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY1949_SYNY3
AccessionPrimary (citable) accession number: P74511
Entry history
Integrated into UniProtKB/Swiss-Prot: October 14, 2008
Last sequence update: February 1, 1997
Last modified: February 19, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names