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Protein

Thylakoid membrane protein slr1949

Gene

slr1949

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Thylakoid membrane protein slr1949
Gene namesi
Ordered Locus Names:slr1949
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei109 – 131HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, Thylakoid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003527431 – 212Thylakoid membrane protein slr1949Add BLAST212

Proteomic databases

PRIDEiP74511.

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili180 – 212Sequence analysisAdd BLAST33

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi114 – 122Poly-Leu9

Keywords - Domaini

Coiled coil, Transmembrane, Transmembrane helix

Phylogenomic databases

OMAiQNDTIPK.

Family and domain databases

InterProiIPR021751. DUF3318.
[Graphical view]
PfamiPF11780. DUF3318. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P74511-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSYSSATAR AEMSELRRLK SLLPPELQSW VMVEGSTEVN PPLIRSEELG
60 70 80 90 100
RDEIEIQVDL AKWENLAIDQ RNLLFWHEVA RIQSDTIPRE GWEMAALAIG
110 120 130 140 150
LGGAVGELWV QDGLLLLLAL GLCGISGYRL WQKNNGEKRI KEAIEADEKA
160 170 180 190 200
ITLATRFGYT LPNAYKSLGS AFKTLIEQTP NRRQRKQYET RLQALRQSAA
210
KMKAKTQKAK AL
Length:212
Mass (Da):23,883
Last modified:February 1, 1997 - v1
Checksum:i777F6D5786B83623
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18615.1.
PIRiS76486.

Genome annotation databases

EnsemblBacteriaiBAA18615; BAA18615; BAA18615.
KEGGisyn:slr1949.
PATRICi23841422. VBISynSp132158_2260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18615.1.
PIRiS76486.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiP74511.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA18615; BAA18615; BAA18615.
KEGGisyn:slr1949.
PATRICi23841422. VBISynSp132158_2260.

Phylogenomic databases

OMAiQNDTIPK.

Family and domain databases

InterProiIPR021751. DUF3318.
[Graphical view]
PfamiPF11780. DUF3318. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY1949_SYNY3
AccessioniPrimary (citable) accession number: P74511
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 14, 2008
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.