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Protein

Putative ATP-dependent Clp protease proteolytic subunit-like

Gene

clpR

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Has lost the two conserved residues (Ser and His) proposed to be part of the active site. Therefore it could be inactive.

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ATP-dependent Clp protease proteolytic subunit-like
Alternative name(s):
Endopeptidase Clp-like
Gene namesi
Name:clpR
Ordered Locus Names:slr0164
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001796971 – 225Putative ATP-dependent Clp protease proteolytic subunit-likeAdd BLAST225

Structurei

3D structure databases

ProteinModelPortaliP74466.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase S14 family.Curated

Phylogenomic databases

HOGENOMiHOG000285833.
InParanoidiP74466.
KOiK01358.
OMAiIKPPIHT.
PhylomeDBiP74466.

Family and domain databases

Gene3Di3.90.226.10. 1 hit.
InterProiIPR001907. ClpP.
IPR029045. ClpP/crotonase-like_dom.
IPR023562. ClpP/TepA.
[Graphical view]
PANTHERiPTHR10381. PTHR10381. 1 hit.
PfamiPF00574. CLP_protease. 1 hit.
[Graphical view]
PRINTSiPR00127. CLPPROTEASEP.
SUPFAMiSSF52096. SSF52096. 1 hit.

Sequencei

Sequence statusi: Complete.

P74466-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEITAVQSSY YGDMAFKTPP PDLESLLLKE RIVYLGMPLF SSDEVKQQVG
60 70 80 90 100
IDVTQLIIAQ LLYLQFDDPD KPIYFYINST GTSWYTGDAV GFETEAFAIC
110 120 130 140 150
DTLNYIKPPV HTICIGQAMG TAAMILSSGT KGYRASLPHA TIVLNQNRTG
160 170 180 190 200
AQGQATDIQI RAKEVISNKQ TMLEILSLNT GQTQEKLAKD MDRTFYLTPA
210 220
QAKEYGLIDR VLESPAELPK PMAVI
Length:225
Mass (Da):24,882
Last modified:February 1, 1997 - v1
Checksum:iF7782CCEC17028DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18567.1.
PIRiS76438.

Genome annotation databases

EnsemblBacteriaiBAA18567; BAA18567; BAA18567.
KEGGisyn:slr0164.
PATRICi23841313. VBISynSp132158_2206.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18567.1.
PIRiS76438.

3D structure databases

ProteinModelPortaliP74466.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA18567; BAA18567; BAA18567.
KEGGisyn:slr0164.
PATRICi23841313. VBISynSp132158_2206.

Phylogenomic databases

HOGENOMiHOG000285833.
InParanoidiP74466.
KOiK01358.
OMAiIKPPIHT.
PhylomeDBiP74466.

Family and domain databases

Gene3Di3.90.226.10. 1 hit.
InterProiIPR001907. ClpP.
IPR029045. ClpP/crotonase-like_dom.
IPR023562. ClpP/TepA.
[Graphical view]
PANTHERiPTHR10381. PTHR10381. 1 hit.
PfamiPF00574. CLP_protease. 1 hit.
[Graphical view]
PRINTSiPR00127. CLPPROTEASEP.
SUPFAMiSSF52096. SSF52096. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCLPR_SYNY3
AccessioniPrimary (citable) accession number: P74466
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Peptidase families
    Classification of peptidase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.