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Protein
Submitted name:

Cation or drug efflux system protein

Gene

sll0142

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cation or drug efflux system proteinImported
Gene namesi
Ordered Locus Names:sll0142Imported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei21 – 4121HelicalSequence analysisAdd
BLAST
Transmembranei348 – 36720HelicalSequence analysisAdd
BLAST
Transmembranei374 – 39421HelicalSequence analysisAdd
BLAST
Transmembranei400 – 42122HelicalSequence analysisAdd
BLAST
Transmembranei468 – 48518HelicalSequence analysisAdd
BLAST
Transmembranei491 – 51121HelicalSequence analysisAdd
BLAST
Transmembranei555 – 57420HelicalSequence analysisAdd
BLAST
Transmembranei890 – 90920HelicalSequence analysisAdd
BLAST
Transmembranei916 – 93419HelicalSequence analysisAdd
BLAST
Transmembranei940 – 96021HelicalSequence analysisAdd
BLAST
Transmembranei992 – 101019HelicalSequence analysisAdd
BLAST
Transmembranei1022 – 104625HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

IntActiP74461. 6 interactions.

Structurei

3D structure databases

ProteinModelPortaliP74461.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. [View classification]SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000158131.
InParanoidiP74461.
OMAiEHTESTS.
PhylomeDBiP74461.

Family and domain databases

Gene3Di3.30.2090.10. 2 hits.
InterProiIPR027463. AcrB_DN_DC_subdom.
IPR001036. Acrflvin-R.
[Graphical view]
PfamiPF00873. ACR_tran. 1 hit.
[Graphical view]
PRINTSiPR00702. ACRIFLAVINRP.
SUPFAMiSSF82714. SSF82714. 2 hits.

Sequencei

Sequence statusi: Complete.

P74461-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSPNSVFSL SGLAIRRHIA TLMLTLAIIV LGVFAVFSLP VDLLPSITYP
60 70 80 90 100
RIGVRLDAPG VSPEVAVDEI TRPLEAALSA TEGVVQVYSQ TREGQISLDL
110 120 130 140 150
FFEPGGNIDQ ALNDATATFN RARNQLPDDL ETPRLFKFDP SQLPVYEFAV
160 170 180 190 200
TSPELSGPSL RVFAEEELAR ELGVVPGVAS VNVSGAAQEE VRINVDLQRL
210 220 230 240 250
QRSGVSLTQV LDALQSRNVD ISGGRIVGTE SEPLTRTVGR FASAQEIEDL
260 270 280 290 300
VVGTVSGLED QSAQKVYLRD VATVIDGTEE ERIFVTLNGN PAVKVSVQKQ
310 320 330 340 350
PEANTIEVVD GVKKRLEELR TEGIIPQAAE LTPTLDDSVF IRNSVNNVVV
360 370 380 390 400
SGLIGTVLAA IAVLLFLGSL RQTLIIVLAI PLATMAAIIV MKAFGLSLNV
410 420 430 440 450
FSLGGLALGV GIVVDNSIVM LETIAEGAGM TPGKVNPLPL TKGEMRNQAI
460 470 480 490 500
ASSQTVESAL VASTSTNLVA VLPFLMIGGF IALIFNELIL TISFAVAASI
510 520 530 540 550
LVAVTLVPMA ASRLLAIRRR SGLGNWLFFR EFNRRFAGAT AAYARFLSIL
560 570 580 590 600
IRHRLVAVAS IFIVFGGSSL WMIGQIPQEI LPRINTGQAS MFAQFPPGTP
610 620 630 640 650
LEENQRLMAI VDDILINQPE TEYAFTTVGG FLFGSNVNAN ALRSSSTITL
660 670 680 690 700
KPNTDVEAFT ERVTAELEAL NLVDIRLRMA PGQLRGLILS NSPLRNVDVD
710 720 730 740 750
VVLQGNDADV LDEAGRAVLA ELGEKVTLAR FRPDADPRQP EVQIRPDWQR
760 770 780 790 800
ATELGLTTQA IGQTVQTALD GAVPTQLQRE NRLVDVRVKL DNDLLSGPGD
810 820 830 840 850
LAQIPLFIDG DRPIRLGDVA TIDQGRAPGE IQRINQRPVF LIAGTLVEGA
860 870 880 890 900
SLSEALTEVD QVLSAMEFPP GVSRLPSTAA ASNEQLQSSL VILGGLAAFL
910 920 930 940 950
VFVVMAVQYN SLLDPLVIMF TLPLALAGGI LGLYVTQTAI GATVIVGTVL
960 970 980 990 1000
LVGIVVNNAI IMVELANQIW AEEGISREAA ILRAAPQRLR PILMTTITTV
1010 1020 1030 1040 1050
LGMFPLALGI GQGSELLQPL GIVVFSGLSL ATLLTLFLIP CLYVLLHQWE
1060 1070
GVDIEKVKTD LESRLTEEDV PTKIQ
Length:1,075
Mass (Da):115,189
Last modified:February 1, 1997 - v1
Checksum:iFA8DCF07B1A1F41C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18562.1.
PIRiS76433.

Genome annotation databases

EnsemblBacteriaiBAA18562; BAA18562; BAA18562.
KEGGisyn:sll0142.
PATRICi23841300. VBISynSp132158_2200.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18562.1.
PIRiS76433.

3D structure databases

ProteinModelPortaliP74461.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP74461. 6 interactions.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA18562; BAA18562; BAA18562.
KEGGisyn:sll0142.
PATRICi23841300. VBISynSp132158_2200.

Phylogenomic databases

HOGENOMiHOG000158131.
InParanoidiP74461.
OMAiEHTESTS.
PhylomeDBiP74461.

Family and domain databases

Gene3Di3.30.2090.10. 2 hits.
InterProiIPR027463. AcrB_DN_DC_subdom.
IPR001036. Acrflvin-R.
[Graphical view]
PfamiPF00873. ACR_tran. 1 hit.
[Graphical view]
PRINTSiPR00702. ACRIFLAVINRP.
SUPFAMiSSF82714. SSF82714. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / KazusaImported.

Entry informationi

Entry nameiP74461_SYNY3
AccessioniPrimary (citable) accession number: P74461
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: May 11, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.