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P74257 (GLPD_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycerol-3-phosphate dehydrogenase
EC=1.1.5.3
Gene names
Name:glpD
Ordered Locus Names:sll1085
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechocystis ›

Protein attributes

Sequence length553 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.

Cofactor

FAD By similarity.

Subcellular location

Cytoplasm By similarity.

Sequence similarities

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.

Ontologies

Keywords
   Biological processGlycerol metabolism
   Cellular componentCytoplasm
   LigandFAD
Flavoprotein
   Molecular functionOxidoreductase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processglycerol metabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

glycerol-3-phosphate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentglycerol-3-phosphate dehydrogenase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 553553Glycerol-3-phosphate dehydrogenase
PRO_0000126106

Regions

Nucleotide binding13 – 4129FAD Potential

Sequences

Sequence LengthMass (Da)Tools
P74257 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 7AB17D9B9C03762D

FASTA55361,575
        10         20         30         40         50         60 
MRNFPEIQNT AYDLIVIGGG INGVGTARDG ALRGLKTLLI EKDDFASGTS SWSTRLIHGG 

        70         80         90        100        110        120 
LRYLEYFEFN LVRESLRERE VLLHTAPHLV QPLQLTIPVY DWSSRAYWEI QAGMILYDIL 

       130        140        150        160        170        180 
SFDKTLPSHR MLSPQQFQQL FRAAEKKGLK GGAQYFDGQV EYAERLDLEV TLSAQKAGAA 

       190        200        210        220        230        240 
MLNYVAVKGL EKGENNLITA IHCQDQLSGE KFTVNSAQAI VINTTGPWVD EVCGLAHRGG 

       250        260        270        280        290        300 
EPVAIVQERK IGGTKGSHIV VDPFPGAPAS ALYVEAFVDK RPYFIIPWLG KYLIGTTDHR 

       310        320        330        340        350        360 
YDGSLDRVKA SDDEIDYLIA ETNRVMPAAQ LTRQDVRFTY SGVRPLPYTD GKKAGSITRN 

       370        380        390        400        410        420 
HILYDHSQDG VNNLISLIGG KLTTYRQVGE EMVDKVYGKL RRSAPPCPTL TQPLPGAEAY 

       430        440        450        460        470        480 
PLSLETAMDK YGNHLERHSI QHLFCLYGAR AGDILALVHG APELGERIIP SLPDIKAQVV 

       490        500        510        520        530        540 
FAVQAEMAHT LVDICRRRTA IAMVTNDYGF SALAGICQTL TDHCGWTQEQ CDKQIQKYHE 

       550 
YMEQNCIPDY CLH

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000022 Genomic DNA. Translation: BAA18351.1.
PIRS75892.
RefSeqNP_441671.1. NC_000911.1.
YP_005651729.1. NC_017277.1.
YP_007451553.1. NC_020286.1.

3D structure databases

ProteinModelPortalP74257.
ModBaseSearch...

Protein-protein interaction databases

IntActP74257. 2 interactions.
STRING1148.sll1085.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA18351; BAA18351; BAA18351.
GeneID12254384.
14617216.
953021.
KEGGsyn:sll1085.
syy:SYNGTS_1776.
PATRIC23840805. VBISynSp132158_1957.

Phylogenomic databases

eggNOGCOG0578.
HOGENOMHOG000004811.
KOK00111.
OMAASALYVE.
ProtClustDBCLSK893228.

Family and domain databases

InterProIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamPF01266. DAO. 1 hit.
[Graphical view]
PRINTSPR01001. FADG3PDH.
PROSITEPS00977. FAD_G3PDH_1. 1 hit.
PS00978. FAD_G3PDH_2. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGLPD_SYNY3
AccessionPrimary (citable) accession number: P74257
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: May 1, 2013
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families

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