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Protein

Glycerol-3-phosphate dehydrogenase

Gene

glpD

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.

Cofactori

FADBy similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi13 – 4129FADSequence AnalysisAdd
BLAST

GO - Molecular functioni

  1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycerol-3-phosphate metabolic process Source: InterPro
  2. glycerol metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Biological processi

Glycerol metabolism

Keywords - Ligandi

FAD, Flavoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Gene namesi
Name:glpD
Ordered Locus Names:sll1085
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425 Componenti: Chromosome

Subcellular locationi

  1. Cytoplasm By similarity

GO - Cellular componenti

  1. glycerol-3-phosphate dehydrogenase complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 553553Glycerol-3-phosphate dehydrogenasePRO_0000126106Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiP74257. 2 interactions.
STRINGi1148.sll1085.

Structurei

3D structure databases

ProteinModelPortaliP74257.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0578.
HOGENOMiHOG000004811.
InParanoidiP74257.
KOiK00111.
OMAiGPWVGDV.
OrthoDBiEOG651SR7.
PhylomeDBiP74257.

Family and domain databases

InterProiIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamiPF01266. DAO. 1 hit.
[Graphical view]
PRINTSiPR01001. FADG3PDH.
PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P74257-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNFPEIQNT AYDLIVIGGG INGVGTARDG ALRGLKTLLI EKDDFASGTS
60 70 80 90 100
SWSTRLIHGG LRYLEYFEFN LVRESLRERE VLLHTAPHLV QPLQLTIPVY
110 120 130 140 150
DWSSRAYWEI QAGMILYDIL SFDKTLPSHR MLSPQQFQQL FRAAEKKGLK
160 170 180 190 200
GGAQYFDGQV EYAERLDLEV TLSAQKAGAA MLNYVAVKGL EKGENNLITA
210 220 230 240 250
IHCQDQLSGE KFTVNSAQAI VINTTGPWVD EVCGLAHRGG EPVAIVQERK
260 270 280 290 300
IGGTKGSHIV VDPFPGAPAS ALYVEAFVDK RPYFIIPWLG KYLIGTTDHR
310 320 330 340 350
YDGSLDRVKA SDDEIDYLIA ETNRVMPAAQ LTRQDVRFTY SGVRPLPYTD
360 370 380 390 400
GKKAGSITRN HILYDHSQDG VNNLISLIGG KLTTYRQVGE EMVDKVYGKL
410 420 430 440 450
RRSAPPCPTL TQPLPGAEAY PLSLETAMDK YGNHLERHSI QHLFCLYGAR
460 470 480 490 500
AGDILALVHG APELGERIIP SLPDIKAQVV FAVQAEMAHT LVDICRRRTA
510 520 530 540 550
IAMVTNDYGF SALAGICQTL TDHCGWTQEQ CDKQIQKYHE YMEQNCIPDY

CLH
Length:553
Mass (Da):61,575
Last modified:February 1, 1997 - v1
Checksum:i7AB17D9B9C03762D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18351.1.
PIRiS75892.
RefSeqiNP_441671.1. NC_000911.1.
YP_005651729.1. NC_017277.1.
YP_007451553.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA18351; BAA18351; BAA18351.
KEGGisyn:sll1085.
PATRICi23840805. VBISynSp132158_1957.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18351.1.
PIRiS75892.
RefSeqiNP_441671.1. NC_000911.1.
YP_005651729.1. NC_017277.1.
YP_007451553.1. NC_020286.1.

3D structure databases

ProteinModelPortaliP74257.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP74257. 2 interactions.
STRINGi1148.sll1085.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA18351; BAA18351; BAA18351.
KEGGisyn:sll1085.
PATRICi23840805. VBISynSp132158_1957.

Phylogenomic databases

eggNOGiCOG0578.
HOGENOMiHOG000004811.
InParanoidiP74257.
KOiK00111.
OMAiGPWVGDV.
OrthoDBiEOG651SR7.
PhylomeDBiP74257.

Family and domain databases

InterProiIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamiPF01266. DAO. 1 hit.
[Graphical view]
PRINTSiPR01001. FADG3PDH.
PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiGLPD_SYNY3
AccessioniPrimary (citable) accession number: P74257
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: April 1, 2015
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.