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Protein

Ycf55-like protein

Gene

sll1879

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Ycf55-like protein
Gene namesi
Ordered Locus Names:sll1879
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002173901 – 562Ycf55-like proteinAdd BLAST562

Proteomic databases

PRIDEiP74126.

Interactioni

Protein-protein interaction databases

DIPiDIP-48808N.
IntActiP74126. 3 interactors.

Structurei

3D structure databases

ProteinModelPortaliP74126.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 125Response regulatoryPROSITE-ProRule annotationAdd BLAST119

Sequence similaritiesi

Belongs to the ycf55 family.Curated
Contains 1 response regulatory domain.PROSITE-ProRule annotation

Phylogenomic databases

HOGENOMiHOG000035678.
OMAiDPIFRLG.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR016837. Uncharacterised_Ycf55_cyanobac.
IPR022552. UPF_Ycf55.
[Graphical view]
PfamiPF12452. DUF3685. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PIRSFiPIRSF026434. RR_ycf55_prd. 1 hit.
SMARTiSM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P74126-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSESPLTIVI VDEDPVFRLG LITVLGRETG VQVLGEGETL DDLRQQLETL
60 70 80 90 100
APSILLIDPQ FPRRSQSAWP LLRQLSSAYP QVKICLLTAS LEYDQLLAAK
110 120 130 140 150
TQGIAAYFPK GTAIADLVTG LKQVHFGQTC WPSLQTVNAP PLSLWEKLIW
160 170 180 190 200
PLFRDGLGQI EQSLQQVQKS LQVPSLSDFD RLFWRGRERE LKFAQWLVRN
210 220 230 240 250
LLPQRLKTWH KATNILTATT TVLPPSPPSP RRSGVRTITL RPPSNLTALG
260 270 280 290 300
QILQQMPLQV ENLTAIPLEL DILQPLKRQE LLSLGQQQLE TTINELKALR
310 320 330 340 350
ITPAQLPENC LSIVAEMWRS LSLTFFGKYC QPKSEFSLEQ IQSLLEVYQP
360 370 380 390 400
IICREKLVKI PFVVPLFHHL LFGEPLVVNQ KAYPLGSTEA QQYSDLYAQN
410 420 430 440 450
LVIQLANSTM VFILNYFADH EAIKLALYEY SMLSSRQVAR FRNDLAWYYQ
460 470 480 490 500
FSRYWLNPKQ IFESQHTLLY LTPAGIVTTQ VYAPRQQELT QLRAVPWFVT
510 520 530 540 550
IVLECRDALS PRVRSVIEFV GNGLVFLLTQ VVGRAIGLVG KGIIQGIGNT
560
WQESRSQQKR SN
Length:562
Mass (Da):63,807
Last modified:February 1, 1997 - v1
Checksum:i52F4246B4DD3C168
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18212.1.
PIRiS75651.

Genome annotation databases

EnsemblBacteriaiBAA18212; BAA18212; BAA18212.
KEGGisyn:sll1879.
PATRICi23840487. VBISynSp132158_1801.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA18212.1.
PIRiS75651.

3D structure databases

ProteinModelPortaliP74126.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-48808N.
IntActiP74126. 3 interactors.

Proteomic databases

PRIDEiP74126.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA18212; BAA18212; BAA18212.
KEGGisyn:sll1879.
PATRICi23840487. VBISynSp132158_1801.

Phylogenomic databases

HOGENOMiHOG000035678.
OMAiDPIFRLG.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR016837. Uncharacterised_Ycf55_cyanobac.
IPR022552. UPF_Ycf55.
[Graphical view]
PfamiPF12452. DUF3685. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PIRSFiPIRSF026434. RR_ycf55_prd. 1 hit.
SMARTiSM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYC55L_SYNY3
AccessioniPrimary (citable) accession number: P74126
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1999
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.