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Protein
Submitted name:

Sll1961 protein

Gene

sll1961

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Sll1961 proteinImported
Gene namesi
Ordered Locus Names:sll1961Imported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

IntActiP73804. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliP73804.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini57 – 12569HTH gntR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH gntR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000233235.
InParanoidiP73804.
KOiK07978.
OMAiNTISKVY.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000524. Tscrpt_reg_HTH_GntR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00392. GntR. 1 hit.
[Graphical view]
SMARTiSM00345. HTH_GNTR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50949. HTH_GNTR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P73804-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMAWARLPVA IKTKPSMNLS PVRAVLSPGM KSGLNLPTPR LPFPKMLQFQ
60 70 80 90 100
IQNDSEIPAS KQLFDQIRFA IASRQYHPGH RLPSTRQLAM MTGLHRNTIS
110 120 130 140 150
KVYQNLEDAG LVESIAGSGI YVKAPSTEEG MILDGPLFRE YPEASQLIQK
160 170 180 190 200
TIDELLGQGL NLSQVKELCL ETIDWRLRST ARVLVTVPQR DIGAGQLILN
210 220 230 240 250
ELEQALVIPV QLVPMETLKQ TLSELPSGTV VTSRYFLAEA ESIATPYDVR
260 270 280 290 300
VIPVDIYDYS KELELVKALP ENSCLGIVSL SPGILTIAEI LIHSLRGESL
310 320 330 340 350
FLKSALVSDP QKLRSLVRTA RTIITDPASE PIVRQAIEAE RHDLIRMPEI
360 370 380
ICSEHYIGEK SIAILKRELG LGEEETEEEG KSTKVATA
Length:388
Mass (Da):42,962
Last modified:February 1, 1997 - v1
Checksum:i0BE0EB2568966602
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17858.1.
PIRiS74897.

Genome annotation databases

EnsemblBacteriaiBAA17858; BAA17858; BAA17858.
KEGGisyn:sll1961.
PATRICi23839671. VBISynSp132158_1397.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17858.1.
PIRiS74897.

3D structure databases

ProteinModelPortaliP73804.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP73804. 1 interaction.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA17858; BAA17858; BAA17858.
KEGGisyn:sll1961.
PATRICi23839671. VBISynSp132158_1397.

Phylogenomic databases

HOGENOMiHOG000233235.
InParanoidiP73804.
KOiK07978.
OMAiNTISKVY.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000524. Tscrpt_reg_HTH_GntR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00392. GntR. 1 hit.
[Graphical view]
SMARTiSM00345. HTH_GNTR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50949. HTH_GNTR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / KazusaImported.

Entry informationi

Entry nameiP73804_SYNY3
AccessioniPrimary (citable) accession number: P73804
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: March 16, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.