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Protein

Putative zinc metalloprotease slr1821

Gene

slr1821

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

Zn2+Curated

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi20 – 201Zinc; catalyticSequence analysis
Active sitei21 – 211Sequence analysis
Metal bindingi24 – 241Zinc; catalyticSequence analysis

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Metalloprotease, Protease

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Putative zinc metalloprotease slr1821 (EC:3.4.24.-)
Gene namesi
Ordered Locus Names:slr1821
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei95 – 11521HelicalSequence analysisAdd
BLAST
Transmembranei293 – 31321HelicalSequence analysisAdd
BLAST
Transmembranei325 – 34521HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 366366Putative zinc metalloprotease slr1821PRO_0000088472Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiP73714. 4 interactions.

Structurei

3D structure databases

ProteinModelPortaliP73714.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini106 – 18883PDZAdd
BLAST

Sequence similaritiesi

Belongs to the peptidase M50B family.Curated
Contains 1 PDZ (DHR) domain.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

InParanoidiP73714.
OMAiQMIVGKR.
OrthoDBiEOG66F07W.
PhylomeDBiP73714.

Family and domain databases

Gene3Di2.30.42.10. 1 hit.
InterProiIPR001478. PDZ.
IPR004387. Pept_M50_Zn.
IPR008915. Peptidase_M50.
[Graphical view]
PfamiPF13180. PDZ_2. 1 hit.
PF02163. Peptidase_M50. 1 hit.
[Graphical view]
SMARTiSM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF50156. SSF50156. 1 hit.
TIGRFAMsiTIGR00054. TIGR00054. 2 hits.

Sequencei

Sequence statusi: Complete.

P73714-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVLAALAAI GVLAVLIAVH ELGHFAAARL QGIHVTRFAL GFGPPLLKYQ
60 70 80 90 100
GAETEYSIRA IPLGGYVAFP DDDPDSEIPA DDPNLLKNRP ILDRAIVISA
110 120 130 140 150
GVIANLVFAY FLLIGQVSTI GFQNIQPGLV IPQVDSASAA QVAGMEPGDI
160 170 180 190 200
VLSLQGNTLP GFPDATTQFI DIVRRSPSVP ITVEVQRGEE TKTLTITPTP
210 220 230 240 250
DAEGKGKIGV ALLPNVETKR ASNPLEALTY SAEAFERIVK LTTQGFWQLI
260 270 280 290 300
SNFADNASQV AGPVKIVEYG ANIARSDASN LFQFGALISI NLAVINILPL
310 320 330 340 350
PALDGGQLVF LLIEGLLGKP LPEKFQMGVM QTGLVLLLSL GVFLIVRDTL
360
NLTFVQEFLP SFTGYE
Length:366
Mass (Da):38,982
Last modified:February 1, 1997 - v1
Checksum:iCCB373F5089255D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17761.1.
PIRiS77203.

Genome annotation databases

EnsemblBacteriaiBAA17761; BAA17761; BAA17761.
KEGGisyn:slr1821.
PATRICi23839456. VBISynSp132158_1292.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17761.1.
PIRiS77203.

3D structure databases

ProteinModelPortaliP73714.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP73714. 4 interactions.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA17761; BAA17761; BAA17761.
KEGGisyn:slr1821.
PATRICi23839456. VBISynSp132158_1292.

Phylogenomic databases

InParanoidiP73714.
OMAiQMIVGKR.
OrthoDBiEOG66F07W.
PhylomeDBiP73714.

Family and domain databases

Gene3Di2.30.42.10. 1 hit.
InterProiIPR001478. PDZ.
IPR004387. Pept_M50_Zn.
IPR008915. Peptidase_M50.
[Graphical view]
PfamiPF13180. PDZ_2. 1 hit.
PF02163. Peptidase_M50. 1 hit.
[Graphical view]
SMARTiSM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF50156. SSF50156. 1 hit.
TIGRFAMsiTIGR00054. TIGR00054. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiY1821_SYNY3
AccessioniPrimary (citable) accession number: P73714
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: March 16, 2016
This is version 119 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Peptidase families
    Classification of peptidase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.