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Protein

Carbon dioxide-concentrating mechanism protein CcmK homolog 3

Gene

ccmK3

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Carbon dioxide-concentrating mechanism protein CcmK homolog 3
Gene namesi
Name:ccmK3
Ordered Locus Names:slr1838
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 103103Carbon dioxide-concentrating mechanism protein CcmK homolog 3PRO_0000201508Add
BLAST

Proteomic databases

PaxDbiP73406.

Interactioni

Protein-protein interaction databases

IntActiP73406. 14 interactions.
STRINGi1148.SYNGTS_0872.

Structurei

3D structure databases

ProteinModelPortaliP73406.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG4577.
HOGENOMiHOG000286836.
InParanoidiP73406.
OMAiITHYIVP.
OrthoDBiEOG6ZH2H4.
PhylomeDBiP73406.

Family and domain databases

InterProiIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamiPF00936. BMC. 1 hit.
[Graphical view]
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P73406-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPQAVGVIQT LGFPSVLAAA DAMLKGGRVT LVYYDLAERG NFVVAIRGPV
60 70 80 90 100
SEVNLSMKMG LAAVNESVMG GEIVSHYIVP NPPENVLAVL PVEYTEKVAR

FRT
Length:103
Mass (Da):11,003
Last modified:February 1, 1997 - v1
Checksum:i203494FA5D483A87
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17446.1.
PIRiS77343.
RefSeqiYP_005650825.1. NC_017277.1.
YP_007450649.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA17446; BAA17446; BAA17446.
KEGGisyn:slr1838.
PATRICi23838758. VBISynSp132158_0945.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17446.1.
PIRiS77343.
RefSeqiYP_005650825.1. NC_017277.1.
YP_007450649.1. NC_020286.1.

3D structure databases

ProteinModelPortaliP73406.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP73406. 14 interactions.
STRINGi1148.SYNGTS_0872.

Proteomic databases

PaxDbiP73406.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA17446; BAA17446; BAA17446.
KEGGisyn:slr1838.
PATRICi23838758. VBISynSp132158_0945.

Phylogenomic databases

eggNOGiCOG4577.
HOGENOMiHOG000286836.
InParanoidiP73406.
OMAiITHYIVP.
OrthoDBiEOG6ZH2H4.
PhylomeDBiP73406.

Family and domain databases

InterProiIPR020808. Bact_microcomp_CS.
IPR000249. Microcompartment_bac.
[Graphical view]
PfamiPF00936. BMC. 1 hit.
[Graphical view]
SMARTiSM00877. BMC. 1 hit.
[Graphical view]
PROSITEiPS01139. BACT_MICROCOMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiCCMK3_SYNY3
AccessioniPrimary (citable) accession number: P73406
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: June 24, 2015
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.