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Protein
Submitted name:

NADH dehydrogenase subunit 4

Gene

ndhD3

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
NADH dehydrogenase subunit 4Imported
Gene namesi
Name:ndhD3Imported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 24HelicalSequence analysisAdd BLAST19
Transmembranei31 – 50HelicalSequence analysisAdd BLAST20
Transmembranei70 – 96HelicalSequence analysisAdd BLAST27
Transmembranei108 – 126HelicalSequence analysisAdd BLAST19
Transmembranei132 – 150HelicalSequence analysisAdd BLAST19
Transmembranei162 – 183HelicalSequence analysisAdd BLAST22
Transmembranei203 – 228HelicalSequence analysisAdd BLAST26
Transmembranei240 – 260HelicalSequence analysisAdd BLAST21
Transmembranei266 – 287HelicalSequence analysisAdd BLAST22
Transmembranei299 – 316HelicalSequence analysisAdd BLAST18
Transmembranei322 – 346HelicalSequence analysisAdd BLAST25
Transmembranei367 – 393HelicalSequence analysisAdd BLAST27
Transmembranei405 – 425HelicalSequence analysisAdd BLAST21
Transmembranei446 – 465HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

IntActiP73394. 6 interactors.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini126 – 418Proton_antipo_MInterPro annotationAdd BLAST293

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000100683.
InParanoidiP73394.
KOiK05575.
OMAiTAYYPRV.
PhylomeDBiP73394.

Family and domain databases

InterProiIPR010227. NADH_Q_OxRdtase_chainM/4.
IPR003918. NADH_UbQ_OxRdtase.
IPR001750. ND/Mrp_mem.
[Graphical view]
PfamiPF00361. Proton_antipo_M. 1 hit.
[Graphical view]
PRINTSiPR01437. NUOXDRDTASE4.
TIGRFAMsiTIGR01972. NDH_I_M. 1 hit.

Sequencei

Sequence statusi: Complete.

P73394-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSLLLILPV IGALIIGFFP GNIPAKQLRQ ITEVFAVLTL VWSLLVLFKF
60 70 80 90 100
DVTDPQFQFQ EYLPWIPQLG LNYSLAIDGL SLPLVILNNL LTGVAIYSIG
110 120 130 140 150
PNVNRSRLYY GLILLINAGI SGALLAQNLL LFIVFYELEL IPFYLMIAIW
160 170 180 190 200
GGEKRGYASM KFLLYTAFSG LLVLAAFLGM SLLSGSHSFD YNPEITQTFT
210 220 230 240 250
ESAQTILLIL ILLGFGIKIP LVPLHTWLPD AYTEASPATA ILLGGILAKL
260 270 280 290 300
GTYGIIRFGL QLFPQTWAQF APVLAIIGTV TVLYGALSAI AQKDIKRMVA
310 320 330 340 350
YSSIGHMGYI LVAAAAGTEL SVLGAVAQMV SHGLILALLF HLVGIVERKA
360 370 380 390 400
GTRDLDVLNG LMNPIRGLPL TSALLITGGM ASAGIPGLVG FAAEFIVFQG
410 420 430 440 450
SFPTFPIPTL LCILASGLTA VYFVILLNRT CFGKLDNQRA YYPKVLASEM
460 470 480 490 500
IPALVLTAII FFLGVQPNYL VHWTQTTTNE MIAQLPHETS AIEQLAQGVT

LP
Length:502
Mass (Da):54,347
Last modified:February 1, 1997 - v1
Checksum:iFC5DC1A9EE04B796
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17434.1.
PIRiS77331.

Genome annotation databases

EnsemblBacteriaiBAA17434; BAA17434; BAA17434.
KEGGisyn:sll1733.
PATRICi23838730. VBISynSp132158_0931.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17434.1.
PIRiS77331.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP73394. 6 interactors.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA17434; BAA17434; BAA17434.
KEGGisyn:sll1733.
PATRICi23838730. VBISynSp132158_0931.

Phylogenomic databases

HOGENOMiHOG000100683.
InParanoidiP73394.
KOiK05575.
OMAiTAYYPRV.
PhylomeDBiP73394.

Family and domain databases

InterProiIPR010227. NADH_Q_OxRdtase_chainM/4.
IPR003918. NADH_UbQ_OxRdtase.
IPR001750. ND/Mrp_mem.
[Graphical view]
PfamiPF00361. Proton_antipo_M. 1 hit.
[Graphical view]
PRINTSiPR01437. NUOXDRDTASE4.
TIGRFAMsiTIGR01972. NDH_I_M. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiP73394_SYNY3
AccessioniPrimary (citable) accession number: P73394
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.