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P73364

- P73364_SYNY3

UniProt

P73364 - P73364_SYNY3

Protein
Submitted name:

AraC subfamily

Gene

slr1213

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 105 (01 Oct 2014)
      Sequence version 1 (01 Feb 1997)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. phosphorelay response regulator activity Source: InterPro
    2. sequence-specific DNA binding Source: InterPro
    3. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotationSAAS annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    AraC subfamilyImported
    Gene namesi
    Ordered Locus Names:slr1213Imported
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    Interactioni

    Protein-protein interaction databases

    IntActiP73364. 11 interactions.
    STRINGi1148.slr1213.

    Structurei

    3D structure databases

    ProteinModelPortaliP73364.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains HTH araC/xylS-type DNA-binding domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG2207.
    OMAiFEYLRHE.
    PhylomeDBiP73364.

    Family and domain databases

    Gene3Di1.10.10.60. 2 hits.
    InterProiIPR011006. CheY-like_superfamily.
    IPR009057. Homeodomain-like.
    IPR018060. HTH_AraC.
    IPR018062. HTH_AraC-typ_CS.
    IPR001789. Sig_transdc_resp-reg_receiver.
    [Graphical view]
    PfamiPF12833. HTH_18. 1 hit.
    PF00072. Response_reg. 1 hit.
    [Graphical view]
    SMARTiSM00342. HTH_ARAC. 1 hit.
    SM00448. REC. 1 hit.
    [Graphical view]
    SUPFAMiSSF46689. SSF46689. 2 hits.
    SSF52172. SSF52172. 1 hit.
    PROSITEiPS00041. HTH_ARAC_FAMILY_1. 1 hit.
    PS01124. HTH_ARAC_FAMILY_2. 1 hit.
    PS50110. RESPONSE_REGULATORY. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P73364-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVTKILIVED ERLVAQHIAQ LLKSDGYEIC VIASDGATAL KKIAEFYPDL    50
    VLLDIRIKGE IDGIEVAERI KSLYSIPIVY LTAFSDGETL ERAQKTNPQG 100
    YVIKPFRREQ LLSTVAIAIA NHQQQRKPEE DTLSTSTGHY RLQPTLDYIE 150
    EHLDQGITVE FLAGAIGMST AYFCRFFQKE MGCSPYQFII QQRVERAKAI 200
    LLERELSISE VALRCGFSSH SQLNHHFRNL LGITPKEYRS R 241
    Length:241
    Mass (Da):27,405
    Last modified:February 1, 1997 - v1
    Checksum:i48E4866D2AC938CA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA17395.1.
    PIRiS77548.
    RefSeqiNP_440715.1. NC_000911.1.
    YP_005650774.1. NC_017277.1.
    YP_007450598.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA17395; BAA17395; BAA17395.
    GeneIDi954018.
    KEGGisyn:slr1213.
    syy:SYNGTS_0821.
    syz:MYO_18260.
    PATRICi23838640. VBISynSp132158_0887.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA17395.1 .
    PIRi S77548.
    RefSeqi NP_440715.1. NC_000911.1.
    YP_005650774.1. NC_017277.1.
    YP_007450598.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali P73364.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P73364. 11 interactions.
    STRINGi 1148.slr1213.

    Protein family/group databases

    AraC-XylS Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA17395 ; BAA17395 ; BAA17395 .
    GeneIDi 954018.
    KEGGi syn:slr1213.
    syy:SYNGTS_0821.
    syz:MYO_18260.
    PATRICi 23838640. VBISynSp132158_0887.

    Phylogenomic databases

    eggNOGi COG2207.
    OMAi FEYLRHE.
    PhylomeDBi P73364.

    Family and domain databases

    Gene3Di 1.10.10.60. 2 hits.
    InterProi IPR011006. CheY-like_superfamily.
    IPR009057. Homeodomain-like.
    IPR018060. HTH_AraC.
    IPR018062. HTH_AraC-typ_CS.
    IPR001789. Sig_transdc_resp-reg_receiver.
    [Graphical view ]
    Pfami PF12833. HTH_18. 1 hit.
    PF00072. Response_reg. 1 hit.
    [Graphical view ]
    SMARTi SM00342. HTH_ARAC. 1 hit.
    SM00448. REC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46689. SSF46689. 2 hits.
    SSF52172. SSF52172. 1 hit.
    PROSITEi PS00041. HTH_ARAC_FAMILY_1. 1 hit.
    PS01124. HTH_ARAC_FAMILY_2. 1 hit.
    PS50110. RESPONSE_REGULATORY. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / KazusaImported.

    Entry informationi

    Entry nameiP73364_SYNY3
    AccessioniPrimary (citable) accession number: P73364
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 1, 1997
    Last sequence update: February 1, 1997
    Last modified: October 1, 2014
    This is version 105 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3