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P73364

- P73364_SYNY3

UniProt

P73364 - P73364_SYNY3

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Protein
Submitted name:

AraC subfamily

Gene

slr1213

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. phosphorelay signal transduction system Source: InterPro
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AraC subfamilyImported
Gene namesi
Ordered Locus Names:slr1213Imported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Interactioni

Protein-protein interaction databases

IntActiP73364. 11 interactions.
STRINGi1148.slr1213.

Structurei

3D structure databases

ProteinModelPortaliP73364.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains HTH araC/xylS-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG2207.
InParanoidiP73364.
OMAiFEYLRHE.
PhylomeDBiP73364.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
InterProiIPR011006. CheY-like_superfamily.
IPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR018062. HTH_AraC-typ_CS.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF12833. HTH_18. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00342. HTH_ARAC. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 2 hits.
SSF52172. SSF52172. 1 hit.
PROSITEiPS00041. HTH_ARAC_FAMILY_1. 1 hit.
PS01124. HTH_ARAC_FAMILY_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P73364-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVTKILIVED ERLVAQHIAQ LLKSDGYEIC VIASDGATAL KKIAEFYPDL
60 70 80 90 100
VLLDIRIKGE IDGIEVAERI KSLYSIPIVY LTAFSDGETL ERAQKTNPQG
110 120 130 140 150
YVIKPFRREQ LLSTVAIAIA NHQQQRKPEE DTLSTSTGHY RLQPTLDYIE
160 170 180 190 200
EHLDQGITVE FLAGAIGMST AYFCRFFQKE MGCSPYQFII QQRVERAKAI
210 220 230 240
LLERELSISE VALRCGFSSH SQLNHHFRNL LGITPKEYRS R
Length:241
Mass (Da):27,405
Last modified:February 1, 1997 - v1
Checksum:i48E4866D2AC938CA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17395.1.
PIRiS77548.
RefSeqiNP_440715.1. NC_000911.1.
YP_005650774.1. NC_017277.1.
YP_007450598.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA17395; BAA17395; BAA17395.
GeneIDi954018.
KEGGisyn:slr1213.
PATRICi23838640. VBISynSp132158_0887.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17395.1 .
PIRi S77548.
RefSeqi NP_440715.1. NC_000911.1.
YP_005650774.1. NC_017277.1.
YP_007450598.1. NC_020286.1.

3D structure databases

ProteinModelPortali P73364.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P73364. 11 interactions.
STRINGi 1148.slr1213.

Protein family/group databases

AraC-XylS Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA17395 ; BAA17395 ; BAA17395 .
GeneIDi 954018.
KEGGi syn:slr1213.
PATRICi 23838640. VBISynSp132158_0887.

Phylogenomic databases

eggNOGi COG2207.
InParanoidi P73364.
OMAi FEYLRHE.
PhylomeDBi P73364.

Family and domain databases

Gene3Di 1.10.10.60. 2 hits.
InterProi IPR011006. CheY-like_superfamily.
IPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR018062. HTH_AraC-typ_CS.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view ]
Pfami PF12833. HTH_18. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view ]
SMARTi SM00342. HTH_ARAC. 1 hit.
SM00448. REC. 1 hit.
[Graphical view ]
SUPFAMi SSF46689. SSF46689. 2 hits.
SSF52172. SSF52172. 1 hit.
PROSITEi PS00041. HTH_ARAC_FAMILY_1. 1 hit.
PS01124. HTH_ARAC_FAMILY_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / KazusaImported.

Entry informationi

Entry nameiP73364_SYNY3
AccessioniPrimary (citable) accession number: P73364
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: November 26, 2014
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3