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Protein

UPF0145 protein sll118

Gene

sll1118

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0145 protein sll118
Gene namesi
Ordered Locus Names:sll1118
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 108108UPF0145 protein sll118PRO_0000138484Add
BLAST

Proteomic databases

PRIDEiP73346.

Interactioni

Protein-protein interaction databases

STRINGi1148.sll1118.

Structurei

3D structure databases

ProteinModelPortaliP73346.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0145 family.Curated

Phylogenomic databases

eggNOGiCOG0393.
InParanoidiP73346.
OMAiDIFGGRS.
OrthoDBiEOG6TN47M.
PhylomeDBiP73346.

Family and domain databases

Gene3Di3.30.110.70. 1 hit.
HAMAPiMF_00338. UPF0145.
InterProiIPR002765. UPF0145.
[Graphical view]
PfamiPF01906. YbjQ_1. 1 hit.
[Graphical view]
SUPFAMiSSF117782. SSF117782. 1 hit.

Sequencei

Sequence statusi: Complete.

P73346-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTSTTDIVQ GRTIARYHGI VTAEVVYGTN ALRDFFAGIR DLIGGRTGSY
60 70 80 90 100
EQIFEKGHRE AIAELTERAQ KLGANGVIGV AVNTGTINID DRGALLLITA

TGTAVTVD
Length:108
Mass (Da):11,450
Last modified:February 1, 1997 - v1
Checksum:i4F8A7BE7EF6F1FB6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17377.1.
PIRiS77530.
RefSeqiNP_440697.1. NC_000911.1.
YP_005650756.1. NC_017277.1.
YP_007450580.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA17377; BAA17377; BAA17377.
GeneIDi954000.
KEGGisyn:sll1118.
PATRICi23838602. VBISynSp132158_0868.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17377.1.
PIRiS77530.
RefSeqiNP_440697.1. NC_000911.1.
YP_005650756.1. NC_017277.1.
YP_007450580.1. NC_020286.1.

3D structure databases

ProteinModelPortaliP73346.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1148.sll1118.

Proteomic databases

PRIDEiP73346.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA17377; BAA17377; BAA17377.
GeneIDi954000.
KEGGisyn:sll1118.
PATRICi23838602. VBISynSp132158_0868.

Phylogenomic databases

eggNOGiCOG0393.
InParanoidiP73346.
OMAiDIFGGRS.
OrthoDBiEOG6TN47M.
PhylomeDBiP73346.

Family and domain databases

Gene3Di3.30.110.70. 1 hit.
HAMAPiMF_00338. UPF0145.
InterProiIPR002765. UPF0145.
[Graphical view]
PfamiPF01906. YbjQ_1. 1 hit.
[Graphical view]
SUPFAMiSSF117782. SSF117782. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiY1118_SYNY3
AccessioniPrimary (citable) accession number: P73346
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: February 1, 1997
Last modified: January 7, 2015
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.