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P73307 (RS8_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S8
Gene names
Name:rpsH
Synonyms:rps8
Ordered Locus Names:sll1809
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length133 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit By similarity. HAMAP-Rule MF_01302

Subunit structure

Part of the 30S ribosomal subunit. Contacts proteins S5 and S12 By similarity.

Sequence similarities

Belongs to the ribosomal protein S8P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 13313330S ribosomal protein S8 HAMAP-Rule MF_01302
PRO_0000126508

Sequences

Sequence LengthMass (Da)Tools
P73307 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 399375B1DC9489A5

FASTA13314,666
        10         20         30         40         50         60 
MASTDTISDM LTRIRNACAV RHSTTQVPTT KMTLSIAKVL KSEGFIEDYS ETGEGINKML 

        70         80         90        100        110        120 
VLTLKYKGKT RQPLINTLQR VSKPGLRVYS PSKKIPRVLG GIGIAIVSTS HGIMTDREAR 

       130 
RQGIGGEILC YIW 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA17336.1.
PIRS77489.
RefSeqNP_440656.1. NC_000911.1.
YP_005650715.1. NC_017277.1.
YP_007450539.1. NC_020286.1.

3D structure databases

ProteinModelPortalP73307.
SMRP73307. Positions 3-133.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING1148.sll1809.

Proteomic databases

PaxDbP73307.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA17336; BAA17336; BAA17336.
GeneID12256407.
14616189.
953959.
KEGGsyn:sll1809.
syy:SYNGTS_0762.
syz:MYO_17670.
PATRIC23838516. VBISynSp132158_0825.

Phylogenomic databases

eggNOGCOG0096.
HOGENOMHOG000204095.
KOK02994.
OMAPNRERSI.
OrthoDBEOG6Z0QH1.
PhylomeDBP73307.
ProtClustDBPRK00136.

Family and domain databases

HAMAPMF_01302_B. Ribosomal_S8_B.
InterProIPR000630. Ribosomal_S8.
[Graphical view]
PANTHERPTHR11758. PTHR11758. 1 hit.
PfamPF00410. Ribosomal_S8. 1 hit.
[Graphical view]
SUPFAMSSF56047. SSF56047. 1 hit.
PROSITEPS00053. RIBOSOMAL_S8. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS8_SYNY3
AccessionPrimary (citable) accession number: P73307
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: April 16, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries