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P73303 (RL15_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L15
Gene names
Name:rplO
Synonyms:rpl15
Ordered Locus Names:sll1813
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length147 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds to the 23S rRNA By similarity. HAMAP-Rule MF_01341

Subunit structure

Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_01341

Sequence similarities

Belongs to the ribosomal protein L15P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentlarge ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 14714750S ribosomal protein L15 HAMAP-Rule MF_01341
PRO_0000104840

Sequences

Sequence LengthMass (Da)Tools
P73303 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 18DC0B2F69B1AE09

FASTA14715,195
        10         20         30         40         50         60 
MNLSELSPKD GAKKRRRRVG RGIAAGQGAS CGFGMRGQKS RSGTGTKAGF EGGQMPLYRR 

        70         80         90        100        110        120 
LPKLKHFPLY NPKHFTVVNV GKLAGLAPNT VVTLESLMEA GIVTSNDGPL KVLGNGELAV 

       130        140 
ALTVHAPCSK AAQAKIEAAG GSVVAQG 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA17332.1.
PIRS77485.
RefSeqNP_440652.1. NC_000911.1.
YP_005650711.1. NC_017277.1.
YP_007450535.1. NC_020286.1.

3D structure databases

ProteinModelPortalP73303.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP73303. 3 interactions.
STRING1148.sll1813.

Proteomic databases

PaxDbP73303.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA17332; BAA17332; BAA17332.
GeneID12256403.
14616185.
953955.
KEGGsyn:sll1813.
syy:SYNGTS_0758.
syz:MYO_17630.
PATRIC23838508. VBISynSp132158_0821.

Phylogenomic databases

eggNOGCOG0200.
HOGENOMHOG000231262.
KOK02876.
OMAPWFRRIG.
OrthoDBEOG6CGCM5.
PhylomeDBP73303.
ProtClustDBPRK05592.

Family and domain databases

HAMAPMF_01341_B. Ribosomal_L15_B.
InterProIPR005749. Ribosomal_L15_bac-type.
IPR001196. Ribosomal_L15_CS.
IPR021131. Ribosomal_L18e/L15P.
[Graphical view]
PANTHERPTHR12934. PTHR12934. 1 hit.
PfamPF00828. Ribosomal_L18e. 1 hit.
[Graphical view]
SUPFAMSSF52080. SSF52080. 1 hit.
TIGRFAMsTIGR01071. rplO_bact. 1 hit.
PROSITEPS00475. RIBOSOMAL_L15. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL15_SYNY3
AccessionPrimary (citable) accession number: P73303
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: April 16, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries