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Protein

50S ribosomal protein L15

Gene

rplO

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds to the 23S rRNA.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L15UniRule annotation
Gene namesi
Name:rplOUniRule annotation
Synonyms:rpl15
Ordered Locus Names:sll1813
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14714750S ribosomal protein L15PRO_0000104840Add
BLAST

Proteomic databases

PaxDbiP73303.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

IntActiP73303. 3 interactions.
STRINGi1148.sll1813.

Structurei

3D structure databases

ProteinModelPortaliP73303.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L15P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0200.
HOGENOMiHOG000231262.
InParanoidiP73303.
KOiK02876.
OMAiRGHKGLK.
OrthoDBiEOG6CGCM5.
PhylomeDBiP73303.

Family and domain databases

HAMAPiMF_01341. Ribosomal_L15.
InterProiIPR005749. Ribosomal_L15_bac-type.
IPR001196. Ribosomal_L15_CS.
IPR021131. Ribosomal_L18e/L15P.
[Graphical view]
PANTHERiPTHR12934. PTHR12934. 1 hit.
PfamiPF00828. Ribosomal_L18e. 1 hit.
[Graphical view]
SUPFAMiSSF52080. SSF52080. 1 hit.
TIGRFAMsiTIGR01071. rplO_bact. 1 hit.
PROSITEiPS00475. RIBOSOMAL_L15. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P73303-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNLSELSPKD GAKKRRRRVG RGIAAGQGAS CGFGMRGQKS RSGTGTKAGF
60 70 80 90 100
EGGQMPLYRR LPKLKHFPLY NPKHFTVVNV GKLAGLAPNT VVTLESLMEA
110 120 130 140
GIVTSNDGPL KVLGNGELAV ALTVHAPCSK AAQAKIEAAG GSVVAQG
Length:147
Mass (Da):15,195
Last modified:February 1, 1997 - v1
Checksum:i18DC0B2F69B1AE09
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17332.1.
PIRiS77485.
RefSeqiNP_440652.1. NC_000911.1.
YP_005650711.1. NC_017277.1.
YP_007450535.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA17332; BAA17332; BAA17332.
GeneIDi953955.
KEGGisyn:sll1813.
PATRICi23838508. VBISynSp132158_0821.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17332.1.
PIRiS77485.
RefSeqiNP_440652.1. NC_000911.1.
YP_005650711.1. NC_017277.1.
YP_007450535.1. NC_020286.1.

3D structure databases

ProteinModelPortaliP73303.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP73303. 3 interactions.
STRINGi1148.sll1813.

Proteomic databases

PaxDbiP73303.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA17332; BAA17332; BAA17332.
GeneIDi953955.
KEGGisyn:sll1813.
PATRICi23838508. VBISynSp132158_0821.

Phylogenomic databases

eggNOGiCOG0200.
HOGENOMiHOG000231262.
InParanoidiP73303.
KOiK02876.
OMAiRGHKGLK.
OrthoDBiEOG6CGCM5.
PhylomeDBiP73303.

Family and domain databases

HAMAPiMF_01341. Ribosomal_L15.
InterProiIPR005749. Ribosomal_L15_bac-type.
IPR001196. Ribosomal_L15_CS.
IPR021131. Ribosomal_L18e/L15P.
[Graphical view]
PANTHERiPTHR12934. PTHR12934. 1 hit.
PfamiPF00828. Ribosomal_L18e. 1 hit.
[Graphical view]
SUPFAMiSSF52080. SSF52080. 1 hit.
TIGRFAMsiTIGR01071. rplO_bact. 1 hit.
PROSITEiPS00475. RIBOSOMAL_L15. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiRL15_SYNY3
AccessioniPrimary (citable) accession number: P73303
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: January 7, 2015
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.