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P73270 (SPEB2_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 88. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable agmatinase 2

EC=3.5.3.11
Alternative name(s):
Agmatine ureohydrolase 2
Short name=AUH 2
Gene names
Name:speB2
Ordered Locus Names:sll1077
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length390 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Agmatine + H2O = putrescine + urea.

Cofactor

Manganese Potential.

Sequence similarities

Belongs to the arginase family. Agmatinase subfamily.

Ontologies

Keywords
   Biological processPutrescine biosynthesis
   LigandManganese
Metal-binding
   Molecular functionHydrolase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processputrescine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionagmatinase activity

Inferred from electronic annotation. Source: UniProtKB-EC

metal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 390390Probable agmatinase 2
PRO_0000173745

Sites

Metal binding1741Manganese By similarity
Metal binding1991Manganese By similarity
Metal binding2011Manganese By similarity
Metal binding2031Manganese By similarity
Metal binding2911Manganese By similarity
Metal binding2931Manganese By similarity

Sequences

Sequence LengthMass (Da)Tools
P73270 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 7612DBDD6C29A133

FASTA39042,964
        10         20         30         40         50         60 
MSDATPFRPP SEAEEALIKE TRLPLTGWQQ EVDQGLTYGL EAAASIKDRS IPTFSRGELP 

        70         80         90        100        110        120 
HYAGINTFMK APYLEDVREV GKYDVAIVGV PHDSGTTYRP GTRFGPQGIR RISALYTPYN 

       130        140        150        160        170        180 
FEMGVDLREQ ISLCDVGDIF TIPANNEKSF DQISKGIAHI FSSGAFPIIL GGDHSIGFPT 

       190        200        210        220        230        240 
VRGICRHLGD KKVGIIHFDR HVDTQETDLD ERMHTCPWFH ATNMANAPAK NLVQLGIGGW 

       250        260        270        280        290        300 
QVPRQGVKVC RERATNILTV TDITEMSLDA AADFAIARAT DGTDCVWISF DIDCIDAGFV 

       310        320        330        340        350        360 
PGTGWPEPGG LLPREALYLL KRIIRETNVC GMEVVEVSPP YDISDMTSLM ATRVICDTMA 

       370        380        390 
HLVVSGQLPR TEKPAYIHAE ANMAVDEPWQ 

« Hide

References

« Hide 'large scale' references
[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.
[2]"Arginine catabolism in the cyanobacterium Synechocystis sp. strain PCC 6803 involves the urea cycle and arginase pathway."
Quintero M.J., Muro-Pastor A.M., Herrero A., Flores E.
J. Bacteriol. 182:1008-1015(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: FUNCTION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA17298.1.
PIRS77451.
RefSeqNP_440618.1. NC_000911.1.
YP_005650676.1. NC_017277.1.
YP_007450501.1. NC_020286.1.

3D structure databases

ProteinModelPortalP73270.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP73270. 1 interaction.
STRING1148.sll1077.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA17298; BAA17298; BAA17298.
GeneID953921.
KEGGsyn:sll1077.
syy:SYNGTS_0723.
syz:MYO_17290.
PATRIC23838432. VBISynSp132158_0783.

Phylogenomic databases

eggNOGCOG0010.
HOGENOMHOG000224476.
KOK01480.
OMAKPDYSLY.
OrthoDBEOG6R2GW5.
PhylomeDBP73270.

Family and domain databases

Gene3D3.40.800.10. 1 hit.
InterProIPR005925. Agmatinase-rel.
IPR006035. Ureohydrolase.
IPR023696. Ureohydrolase_domain.
IPR020855. Ureohydrolase_Mn_BS.
[Graphical view]
PANTHERPTHR11358. PTHR11358. 1 hit.
PfamPF00491. Arginase. 1 hit.
[Graphical view]
PIRSFPIRSF036979. Arginase. 1 hit.
PRINTSPR00116. ARGINASE.
TIGRFAMsTIGR01230. agmatinase. 1 hit.
PROSITEPS01053. ARGINASE_1. 1 hit.
PS51409. ARGINASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSPEB2_SYNY3
AccessionPrimary (citable) accession number: P73270
Entry history
Integrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: February 1, 1997
Last modified: July 9, 2014
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families