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Protein
Submitted name:

Sll1286 protein

Gene

sll1286

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi64 – 83H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Sll1286 proteinImported
Gene namesi
Ordered Locus Names:sll1286Imported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Structurei

3D structure databases

ProteinModelPortaliP73186.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini41 – 101HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Phylogenomic databases

HOGENOMiHOG000035433.
InParanoidiP73186.
OMAiEAQFHPE.
PhylomeDBiP73186.

Family and domain databases

InterProiView protein in InterPro
IPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
IPR011075. Tet_transcr_reg_TetR-rel_C.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiView protein in PROSITE
PS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

P73186-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRRSGFFPHN NSNSSVNLEV KSVQSNKYSI APSTFTNPAE ASTHDRILKG
60 70 80 90 100
ALKLFGTKGY EGTTTKDLAQ AANVAEGTLF RYFTNKKAIL VEVATAGWVE
110 120 130 140 150
ILTDLLTELS EMGSYKAIAQ VMKRRMFHLR ENKYLLQVCF VEAQYHPELR
160 170 180 190 200
EKIQSEIIDK MTDVAEAFFQ TAMDRGIYRR MNPKIVAQVF LGMFAVAGFS
210 220 230
EQTVIDPHAS PQALQEMAEG LADIFLNGVL AKGEKM
Length:236
Mass (Da):26,384
Last modified:February 1, 1997 - v1
Checksum:i12857461D1E2DBAD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17212.1.
PIRiS75298.

Genome annotation databases

EnsemblBacteriaiBAA17212; BAA17212; BAA17212.
KEGGisyn:sll1286.
PATRICi23838246. VBISynSp132158_0690.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17212.1.
PIRiS75298.

3D structure databases

ProteinModelPortaliP73186.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA17212; BAA17212; BAA17212.
KEGGisyn:sll1286.
PATRICi23838246. VBISynSp132158_0690.

Phylogenomic databases

HOGENOMiHOG000035433.
InParanoidiP73186.
OMAiEAQFHPE.
PhylomeDBiP73186.

Family and domain databases

InterProiView protein in InterPro
IPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
IPR011075. Tet_transcr_reg_TetR-rel_C.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiView protein in PROSITE
PS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiP73186_SYNY3
AccessioniPrimary (citable) accession number: P73186
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: May 10, 2017
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.