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Protein

Probable ABC transporter permease protein slr1045

Gene

slr1045

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Could be part of an ABC transporter complex.By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Probable ABC transporter permease protein slr1045
Gene namesi
Ordered Locus Names:slr1045
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3221HelicalSequence AnalysisAdd
BLAST
Transmembranei52 – 7221HelicalSequence AnalysisAdd
BLAST
Transmembranei97 – 11721HelicalSequence AnalysisAdd
BLAST
Transmembranei140 – 16223HelicalSequence AnalysisAdd
BLAST
Transmembranei167 – 18620HelicalSequence AnalysisAdd
BLAST
Transmembranei192 – 21221HelicalSequence AnalysisAdd
BLAST
Transmembranei234 – 25421HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 263263Probable ABC transporter permease protein slr1045PRO_0000277460Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiP73009. 9 interactions.
STRINGi1148.slr1045.

Family & Domainsi

Sequence similaritiesi

Belongs to the MlaE permease family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0767.
InParanoidiP73009.
KOiK02066.
OMAiLMEAGPG.
OrthoDBiEOG6RJV8Q.
PhylomeDBiP73009.

Family and domain databases

InterProiIPR003453. ABC_permease_MlaE.
IPR030802. Permease.
[Graphical view]
PANTHERiPTHR30188. PTHR30188. 1 hit.
PfamiPF02405. Permease. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00056. TIGR00056. 1 hit.

Sequencei

Sequence statusi: Complete.

P73009-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDRGSRHSL SLWFQRLVAA FFLTGQVFLH ILQGRINRRN TLEQMNMVGP
60 70 80 90 100
ESMAIALITA GFVGMVFTIQ VAREFIYYGA TTTIGGVLSL SLTRELAPVL
110 120 130 140 150
TAVVIAGRVG SAFAAEIGTM RVTEQLDALY MLRTDPIDYL VVPRVIACGL
160 170 180 190 200
MLPILTGLSL FVGMAGGLVI SSSLYAINPT IFLNSVQNFT QLWDVFACLF
210 220 230 240 250
KSLVFGVIIA IIGCSWGLTT TGGAKGVGES TTTAVVTSLL AIFISNFFLS
260
WLMFQGTGDT ALG
Length:263
Mass (Da):28,242
Last modified:February 1, 1997 - v1
Checksum:i75F08B60C54AF1A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17029.1.
PIRiS74989.
RefSeqiYP_005650406.1. NC_017277.1.
YP_007450233.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA17029; BAA17029; BAA17029.
KEGGisyn:slr1045.
PATRICi23837848. VBISynSp132158_0493.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA17029.1.
PIRiS74989.
RefSeqiYP_005650406.1. NC_017277.1.
YP_007450233.1. NC_020286.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP73009. 9 interactions.
STRINGi1148.slr1045.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA17029; BAA17029; BAA17029.
KEGGisyn:slr1045.
PATRICi23837848. VBISynSp132158_0493.

Phylogenomic databases

eggNOGiCOG0767.
InParanoidiP73009.
KOiK02066.
OMAiLMEAGPG.
OrthoDBiEOG6RJV8Q.
PhylomeDBiP73009.

Family and domain databases

InterProiIPR003453. ABC_permease_MlaE.
IPR030802. Permease.
[Graphical view]
PANTHERiPTHR30188. PTHR30188. 1 hit.
PfamiPF02405. Permease. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00056. TIGR00056. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiY1045_SYNY3
AccessioniPrimary (citable) accession number: P73009
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: February 1, 1997
Last modified: May 27, 2015
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.