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P73009 (Y1045_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 87. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable ABC transporter permease protein slr1045
Gene names
Ordered Locus Names:slr1045
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length263 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Could be part of an ABC transporter complex By similarity.

Subcellular location

Cell membrane; Multi-pass membrane protein By similarity.

Sequence similarities

Belongs to the MlaE permease family.

Ontologies

Keywords
   Biological processTransport
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtransport

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 263263Probable ABC transporter permease protein slr1045
PRO_0000277460

Regions

Transmembrane12 – 3221Helical; Potential
Transmembrane52 – 7221Helical; Potential
Transmembrane97 – 11721Helical; Potential
Transmembrane140 – 16223Helical; Potential
Transmembrane167 – 18620Helical; Potential
Transmembrane192 – 21221Helical; Potential
Transmembrane234 – 25421Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P73009 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 75F08B60C54AF1A7

FASTA26328,242
        10         20         30         40         50         60 
MSDRGSRHSL SLWFQRLVAA FFLTGQVFLH ILQGRINRRN TLEQMNMVGP ESMAIALITA 

        70         80         90        100        110        120 
GFVGMVFTIQ VAREFIYYGA TTTIGGVLSL SLTRELAPVL TAVVIAGRVG SAFAAEIGTM 

       130        140        150        160        170        180 
RVTEQLDALY MLRTDPIDYL VVPRVIACGL MLPILTGLSL FVGMAGGLVI SSSLYAINPT 

       190        200        210        220        230        240 
IFLNSVQNFT QLWDVFACLF KSLVFGVIIA IIGCSWGLTT TGGAKGVGES TTTAVVTSLL 

       250        260 
AIFISNFFLS WLMFQGTGDT ALG 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA17029.1.
PIRS74989.
RefSeqNP_440349.1. NC_000911.1.
YP_005650406.1. NC_017277.1.
YP_007450233.1. NC_020286.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP73009. 9 interactions.
STRING1148.slr1045.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA17029; BAA17029; BAA17029.
GeneID953649.
KEGGsyn:slr1045.
syy:SYNGTS_0453.
syz:MYO_14590.
PATRIC23837848. VBISynSp132158_0493.

Phylogenomic databases

eggNOGCOG0767.
KOK02066.
OMADMIVALV.
OrthoDBEOG6RJV8Q.
PhylomeDBP73009.

Family and domain databases

InterProIPR003453. Permease.
[Graphical view]
PfamPF02405. Permease. 1 hit.
[Graphical view]
TIGRFAMsTIGR00056. TIGR00056. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY1045_SYNY3
AccessionPrimary (citable) accession number: P73009
Entry history
Integrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: February 1, 1997
Last modified: July 9, 2014
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families