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P72970

- Y1592_SYNY3

UniProt

P72970 - Y1592_SYNY3

Protein

Uncharacterized RNA pseudouridine synthase slr1592

Gene

slr1592

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 90 (01 Oct 2014)
      Sequence version 1 (01 Feb 1997)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    RNA uridine = RNA pseudouridine.

    GO - Molecular functioni

    1. pseudouridine synthase activity Source: InterPro
    2. RNA binding Source: InterPro

    GO - Biological processi

    1. pseudouridine synthesis Source: InterPro

    Keywords - Molecular functioni

    Isomerase

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized RNA pseudouridine synthase slr1592 (EC:5.4.99.-)
    Alternative name(s):
    RNA pseudouridylate synthase
    RNA-uridine isomerase
    Gene namesi
    Ordered Locus Names:slr1592
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 291291Uncharacterized RNA pseudouridine synthase slr1592PRO_0000162746Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    IntActiP72970. 2 interactions.
    STRINGi1148.slr1592.

    Structurei

    3D structure databases

    ProteinModelPortaliP72970.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the pseudouridine synthase RluA family.Curated

    Phylogenomic databases

    eggNOGiCOG0564.
    KOiK06180.
    OMAiWIWGPEP.
    OrthoDBiEOG6P070X.
    PhylomeDBiP72970.

    Family and domain databases

    InterProiIPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view]
    PfamiPF00849. PseudoU_synth_2. 1 hit.
    [Graphical view]
    SMARTiSM00363. S4. 1 hit.
    [Graphical view]
    SUPFAMiSSF55120. SSF55120. 1 hit.
    TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
    PROSITEiPS01129. PSI_RLU. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P72970-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLDFYSQRYL HSERQAWQER IEQGQIEVDG KTVDPTYPLQ AGQTLTYWRS    50
    PWVEPEVPLQ LSVLHRDEDL WAIDKPSGLP VLPGGDFVYH TVLEQLKIQY 100
    PQESLFPLHR LGTGTSGLLL LGRSTLGRRE LSRQFREHIC RKIYRTVIGP 150
    CDLPEKFECH QAIGKIPYPQ LGYIYAASSH GKPAQSYGRI LARSPEKTWL 200
    EVEIRTGRPH QIRIHLASLG YPLLGDRLYG PGGVPINCRT ARPSDGGYTL 250
    HSYQLGFLHL HTQQAIKLTA PLPPELITPE VKTIALETEK H 291
    Length:291
    Mass (Da):33,096
    Last modified:February 1, 1997 - v1
    Checksum:iD93D79A569920AE8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA16988.1.
    PIRiS74948.
    RefSeqiNP_440308.1. NC_000911.1.
    YP_005650365.1. NC_017277.1.
    YP_007450191.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA16988; BAA16988; BAA16988.
    GeneIDi953607.
    KEGGisyn:slr1592.
    syy:SYNGTS_0412.
    syz:MYO_14170.
    PATRICi23837754. VBISynSp132158_0446.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA16988.1 .
    PIRi S74948.
    RefSeqi NP_440308.1. NC_000911.1.
    YP_005650365.1. NC_017277.1.
    YP_007450191.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali P72970.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P72970. 2 interactions.
    STRINGi 1148.slr1592.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA16988 ; BAA16988 ; BAA16988 .
    GeneIDi 953607.
    KEGGi syn:slr1592.
    syy:SYNGTS_0412.
    syz:MYO_14170.
    PATRICi 23837754. VBISynSp132158_0446.

    Phylogenomic databases

    eggNOGi COG0564.
    KOi K06180.
    OMAi WIWGPEP.
    OrthoDBi EOG6P070X.
    PhylomeDBi P72970.

    Family and domain databases

    InterProi IPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view ]
    Pfami PF00849. PseudoU_synth_2. 1 hit.
    [Graphical view ]
    SMARTi SM00363. S4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55120. SSF55120. 1 hit.
    TIGRFAMsi TIGR00005. rluA_subfam. 1 hit.
    PROSITEi PS01129. PSI_RLU. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiY1592_SYNY3
    AccessioniPrimary (citable) accession number: P72970
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 1998
    Last sequence update: February 1, 1997
    Last modified: October 1, 2014
    This is version 90 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3