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Protein

UPF0187 protein sll1024

Gene

sll1024

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0187 protein sll1024
Gene namesi
Ordered Locus Names:sll1024
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei26 – 46HelicalSequence analysisAdd BLAST21
Transmembranei54 – 74HelicalSequence analysisAdd BLAST21
Transmembranei247 – 267HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002176701 – 307UPF0187 protein sll1024Add BLAST307

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0187 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

InParanoidiP72926.
KOiK08994.
OMAiTRMIERT.
PhylomeDBiP72926.

Family and domain databases

InterProiIPR021134. Bestrophin/UPF0187.
[Graphical view]
PfamiPF01062. Bestrophin. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P72926-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFFSHHPSR SPRIWTDILL RWQGSVIPAI ASRVLVCMAF SLGVTLVDGW
60 70 80 90 100
GYKFSIPIQE SIVPSIVLGL LLVFRTNTAY ERFWEGRKAW GTMVNTIRNL
110 120 130 140 150
SRIIWVSVAE PSPQAHQDKI KILHLLVAFA VATKLHLRSQ PLNEEIWALL
160 170 180 190 200
PESGYRKLED LNNPPLEIAF WISNYLQREY DQNNINAYQL TAMLRLVDTM
210 220 230 240 250
VDVLGSCERI LKTPIPLAYA IHLRQLIFLY CFITPFQIVN TLHWATAFVV
260 270 280 290 300
GIIAFTVFGI EEIGVEIENP FGHDANDLPL DQICQTMQAN LEDLIQLPPW

HQISHGD
Length:307
Mass (Da):35,071
Last modified:February 21, 2002 - v2
Checksum:i2DDA908701620204
GO

Sequence cautioni

The sequence BAA16943 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA16943.1. Different initiation.
PIRiS74792.

Genome annotation databases

EnsemblBacteriaiBAA16943; BAA16943; BAA16943.
KEGGisyn:sll1024.
PATRICi23837654. VBISynSp132158_0397.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA16943.1. Different initiation.
PIRiS74792.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA16943; BAA16943; BAA16943.
KEGGisyn:sll1024.
PATRICi23837654. VBISynSp132158_0397.

Phylogenomic databases

InParanoidiP72926.
KOiK08994.
OMAiTRMIERT.
PhylomeDBiP72926.

Family and domain databases

InterProiIPR021134. Bestrophin/UPF0187.
[Graphical view]
PfamiPF01062. Bestrophin. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY1024_SYNY3
AccessioniPrimary (citable) accession number: P72926
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 21, 2002
Last sequence update: February 21, 2002
Last modified: November 2, 2016
This is version 96 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.