P72887 (P72887_SYNY3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
dTDP-6-deoxy-L-mannose-dehydrogenase EMBL BAA16903.1

Gene names

Name:	rfbC EMBL BAA16903.1
Ordered Locus Names:	slr0985

Organism

Synechocystis sp. (strain PCC 6803 / Kazusa)

Taxonomic identifier

1111708 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechocystis

Protein attributes

Sequence length	189 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	dTDP-4-dehydrorhamnose 3,5-epimerase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	P72887 [UniParc]. Last modified February 1, 1997. Version 1. Checksum: 5B6AD483B7471210	FASTA	189	20,942
	10 20 30 40 50 60 MTTMGRFLTE DLGIAGLRTV IRQPIGDRRG FLARLFCAEE LKEVGWHKPI AQINHTHTAQ 70 80 90 100 110 120 GGTVRGMHYQ NPPSAEMKLV TCIRGQVWDV AVDLRVDSPT FLTWQGVVLS ADNNRALLIP 130 140 150 160 170 180 EGCAHGFQAL SDDVELIYCH SVAYNPMAEG GLNPQDPRLG IEWPQAITEL SQRDQNHPLL DSTFLGLSL

References

[1]

"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions." Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S. DNA Res. 3:109-136(1996) [PubMed: 8905231] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27184 / PCC 6803 / N-1.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000022 Genomic DNA. Translation: BAA16903.1.
PIR	S74752.
RefSeq	NP_440223.1. NC_000911.1.
3D structure databases
HSSP	HSSP built from PDB template 1DZR based on UniProtKB P26394.
ProteinModelPortal	P72887.
ModBase	Search...
Protein-protein interaction databases
STRING	P72887.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	953522.
GenomeReviews	Gene locus slr0985 in contig BA000022_GR.
KEGG	syn:slr0985.
NMPDR	fig|1148.1.peg.324.
PATRIC	23837580. VBISynSp132158_0360.
Phylogenomic databases
eggNOG	COG1898.
HOGENOM	HBG730537.
OMA	QINHSHT.
PhylomeDB	P72887.
Enzyme and pathway databases
BioCyc	SSP1148:SLR0985-MONOMER.
Family and domain databases
InterPro	IPR011051. Cupin_RmlC_type. IPR000888. dTDP_sugar_isom. IPR014710. RmlC-like_jellyroll. [Graphical view]
Gene3D	G3DSA:2.60.120.10. RmlC-like_jellyroll. 1 hit.
KO	K01790.
PANTHER	PTHR21047. dTDP_sugar_isom. 1 hit.
Pfam	PF00908. dTDP_sugar_isom. 1 hit. [Graphical view]
ProDom	PD001462. dTDP_sugar_isom. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF51182. RmlC_like_cupin. 1 hit.
ProtoNet	Search...

Entry information

Entry name

P72887_SYNY3

Accession

Primary (citable) accession number: P72887

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 1997
Last sequence update:	February 1, 1997
Last modified:	January 25, 2012
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)