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Protein

Carbon dioxide concentrating mechanism protein CcmL

Gene

ccmL

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Carbon dioxide concentrating mechanism protein CcmL
Gene namesi
Name:ccmL
Ordered Locus Names:sll1030
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000894271 – 100Carbon dioxide concentrating mechanism protein CcmLAdd BLAST100

Interactioni

Protein-protein interaction databases

IntActiP72759. 5 interactors.

Structurei

Secondary structure

1100
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi2 – 11Combined sources10
Beta strandi13 – 15Combined sources3
Helixi17 – 19Combined sources3
Beta strandi24 – 30Combined sources7
Beta strandi36 – 47Combined sources12
Beta strandi54 – 59Combined sources6
Helixi60 – 64Combined sources5
Beta strandi75 – 86Combined sources12
Beta strandi88 – 94Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2QW7X-ray2.40A/B/C/D/E/F/G/H/I/J1-100[»]
ProteinModelPortaliP72759.
SMRiP72759.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP72759.

Family & Domainsi

Sequence similaritiesi

To E.coli and S.typhimurium CchB.Curated

Phylogenomic databases

HOGENOMiHOG000287950.
InParanoidiP72759.
KOiK08697.
OMAiGAGINEW.
PhylomeDBiP72759.

Family and domain databases

CDDicd01614. EutN_CcmL. 1 hit.
Gene3Di2.40.50.220. 1 hit.
InterProiIPR004992. EutN_CcmL.
[Graphical view]
PfamiPF03319. EutN_CcmL. 1 hit.
[Graphical view]
ProDomiPD012510. EutN_CcmL. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF159133. SSF159133. 1 hit.

Sequencei

Sequence statusi: Complete.

P72759-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQLAKVLGTV VSTSKTPNLT GVKLLLVQFL DTKGQPLERY EVAGDVVGAG
60 70 80 90 100
LNEWVLVARG SAARKERGNG DRPLDAMVVG IIDTVNVASG SLYNKRDDGR
Length:100
Mass (Da):10,638
Last modified:February 1, 1997 - v1
Checksum:i745B80ED084E7680
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA16774.1.
PIRiS74622.

Genome annotation databases

EnsemblBacteriaiBAA16774; BAA16774; BAA16774.
KEGGisyn:sll1030.
PATRICi23837276. VBISynSp132158_0212.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA16774.1.
PIRiS74622.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2QW7X-ray2.40A/B/C/D/E/F/G/H/I/J1-100[»]
ProteinModelPortaliP72759.
SMRiP72759.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP72759. 5 interactors.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA16774; BAA16774; BAA16774.
KEGGisyn:sll1030.
PATRICi23837276. VBISynSp132158_0212.

Phylogenomic databases

HOGENOMiHOG000287950.
InParanoidiP72759.
KOiK08697.
OMAiGAGINEW.
PhylomeDBiP72759.

Miscellaneous databases

EvolutionaryTraceiP72759.

Family and domain databases

CDDicd01614. EutN_CcmL. 1 hit.
Gene3Di2.40.50.220. 1 hit.
InterProiIPR004992. EutN_CcmL.
[Graphical view]
PfamiPF03319. EutN_CcmL. 1 hit.
[Graphical view]
ProDomiPD012510. EutN_CcmL. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF159133. SSF159133. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCCML_SYNY3
AccessioniPrimary (citable) accession number: P72759
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.