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P72742 (P72742_SYNY3) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:slr1098 EMBL BAA16757.1
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length252 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processiron-sulfur cluster assembly

Inferred from direct assay PubMed 12966069. Source: UniProtKB

Complete GO annotation...

Binary interactions

With

Entry

#Exp.

IntAct

Notes

slr1565P745966EBI-765249,EBI-765258

Sequences

Sequence LengthMass (Da)Tools
P72742 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 0A56156F26103E2B

FASTA25227,675
        10         20         30         40         50         60 
MRKYGAMRNQ DDLLLEDSWV DPLDQLDDDV APPPPDPDEM LVLLTSREAP QRMLAARAFC 

        70         80         90        100        110        120 
EIADRRAVEP LINLLGDSCP LVRVSAAYAL GRNTDPTIVE PLIQSLQTDF NGYVRKGLVW 

       130        140        150        160        170        180 
ALGNCGDRRA LAPLIHALKT DISAVRLWSA SSLPNIAKLA YEDVIATIPP LIEGLRRDKM 

       190        200        210        220        230        240 
AAVRSNCAWA VGQLCRELPS NVVYATAIDA LLEALVEDED FGVKEDAKSA LLRLGDARGL 

       250 
QMIEDLEMDG LI 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA16757.1.
PIRS74605.
RefSeqNP_440077.1. NC_000911.1.
YP_005650134.1. NC_017277.1.
YP_007449960.1. NC_020286.1.

3D structure databases

ProteinModelPortalP72742.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP72742. 4 interactions.
STRING1148.slr1098.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA16757; BAA16757; BAA16757.
GeneID12255819.
14615603.
953376.
KEGGsyn:slr1098.
syy:SYNGTS_0181.
syz:MYO_11810.
PATRIC23837238. VBISynSp132158_0193.

Phylogenomic databases

eggNOGCOG1413.
HOGENOMHOG000233189.
OMAVRSNCIW.
PhylomeDBP72742.
ProtClustDBCLSK892520.

Family and domain databases

Gene3D1.25.10.10. 1 hit.
InterProIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR004155. PBS_lyase_HEAT.
[Graphical view]
PfamPF03130. HEAT_PBS. 4 hits.
[Graphical view]
SMARTSM00567. EZ_HEAT. 4 hits.
[Graphical view]
SUPFAMSSF48371. SSF48371. 1 hit.
ProtoNetSearch...

Entry information

Entry nameP72742_SYNY3
AccessionPrimary (citable) accession number: P72742
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: April 16, 2014
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)