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Protein
Submitted name:

Slr0254 protein

Gene

slr0254

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Slr0254 proteinImported
Gene namesi
Ordered Locus Names:slr0254Imported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei28 – 5427HelicalSequence analysisAdd
BLAST
Transmembranei66 – 8621HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini22 – 153132RDDInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000247831.
InParanoidiP72718.
OMAiYFVFFET.
PhylomeDBiP72718.

Family and domain databases

InterProiIPR010432. RDD.
[Graphical view]
PfamiPF06271. RDD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P72718-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALFNHYQVE TPESVELEFT LAGIGNRLYA VLIDYVCLGS VVLILLIIWA
60 70 80 90 100
VLAYNLSLYA SGEWQLWLTA IQIFLIFAVY VGYFVFFETL WQGQTPGKRR
110 120 130 140 150
AKIRVIRGDG RPVGLQEASL RALFRPIDDF LYIGALLIIF GRREKRIGDL
160 170 180 190 200
LAGTLVIRES RDQRGDRLKL QQPEQAKILA AELAQCPGLE RITADHWLVI
210 220 230 240 250
RDYLLRRGDL LPKARQQAEK RLAKQVQERL RLTAPSADNP PEVLLEAVYL
260
ACQDRQTTLT KPKFEL
Length:266
Mass (Da):30,394
Last modified:February 1, 1997 - v1
Checksum:iB21410C6E36C61A2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA16725.1.
PIRiS74573.

Genome annotation databases

EnsemblBacteriaiBAA16725; BAA16725; BAA16725.
KEGGisyn:slr0254.
PATRICi23837168. VBISynSp132158_0159.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA16725.1.
PIRiS74573.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA16725; BAA16725; BAA16725.
KEGGisyn:slr0254.
PATRICi23837168. VBISynSp132158_0159.

Phylogenomic databases

HOGENOMiHOG000247831.
InParanoidiP72718.
OMAiYFVFFET.
PhylomeDBiP72718.

Family and domain databases

InterProiIPR010432. RDD.
[Graphical view]
PfamiPF06271. RDD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP72718_SYNY3
AccessioniPrimary (citable) accession number: P72718
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: March 16, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.