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P72703

- SPEB1_SYNY3

UniProt

P72703 - SPEB1_SYNY3

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Protein

Agmatinase 1

Gene
speB1, sll0228
Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Agmatine + H2O = putrescine + urea.

Cofactori

Manganese Reviewed prediction.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi121 – 1211Manganese By similarity
Metal bindingi145 – 1451Manganese By similarity
Metal bindingi147 – 1471Manganese By similarity
Metal bindingi149 – 1491Manganese By similarity
Metal bindingi228 – 2281Manganese By similarity
Metal bindingi230 – 2301Manganese By similarity

GO - Molecular functioni

  1. agmatinase activity Source: UniProtKB-EC
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. putrescine biosynthetic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Putrescine biosynthesis

Keywords - Ligandi

Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Agmatinase 1 (EC:3.5.3.11)
Alternative name(s):
Agmatine ureohydrolase 1
Short name:
AUH 1
Gene namesi
Name:speB1
Ordered Locus Names:sll0228
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 306306Agmatinase 1PRO_0000173744Add
BLAST

Proteomic databases

PaxDbiP72703.

Interactioni

Protein-protein interaction databases

IntActiP72703. 1 interaction.
STRINGi1148.sll0228.

Structurei

3D structure databases

ProteinModelPortaliP72703.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0010.
KOiK01480.
OMAiLIPVPYD.
OrthoDBiEOG6SR905.
PhylomeDBiP72703.

Family and domain databases

Gene3Di3.40.800.10. 1 hit.
InterProiIPR005925. Agmatinase-rel.
IPR006035. Ureohydrolase.
IPR023696. Ureohydrolase_domain.
IPR020855. Ureohydrolase_Mn_BS.
[Graphical view]
PANTHERiPTHR11358. PTHR11358. 1 hit.
PfamiPF00491. Arginase. 1 hit.
[Graphical view]
PIRSFiPIRSF036979. Arginase. 1 hit.
TIGRFAMsiTIGR01230. agmatinase. 1 hit.
PROSITEiPS01053. ARGINASE_1. 1 hit.
PS51409. ARGINASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P72703-1 [UniParc]FASTAAdd to Basket

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MHSPNKFTSG PKQFLESEAI TSYADAAVVV VPIPYEATTS YRKGCEHGPE    50
AVLEASDQLE AYDEELGTSP CHDLGIYTCA PLADSNKHPA LAGDAMVTEV 100
CDGIAPFVED GKFVVAIGGE HAITTGVVRA MQRGTSEPFT VVQIDAHGDM 150
RDKFEGSCHN HACVMRRVLE LGLPTLPIAI RAICQEEADL IREKNIPVFW 200
AREMADNPNW INEAIASITT QKVFLTIDMD GFDPGFMPGV GTPEPGGLGW 250
YEGLNFFRRL FQTKQVIGCD LMELAPVRGS VVSEFSTAKL AYKLMGYWGE 300
SQRKKL 306
Length:306
Mass (Da):33,463
Last modified:February 1, 1997 - v1
Checksum:i114A8A313A0C4605
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA16710.1.
PIRiS74558.
RefSeqiNP_440030.1. NC_000911.1.
YP_005650087.1. NC_017277.1.
YP_007449913.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA16710; BAA16710; BAA16710.
GeneIDi953327.
KEGGisyn:sll0228.
syy:SYNGTS_0134.
syz:MYO_11320.
PATRICi23837138. VBISynSp132158_0144.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA16710.1 .
PIRi S74558.
RefSeqi NP_440030.1. NC_000911.1.
YP_005650087.1. NC_017277.1.
YP_007449913.1. NC_020286.1.

3D structure databases

ProteinModelPortali P72703.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P72703. 1 interaction.
STRINGi 1148.sll0228.

Proteomic databases

PaxDbi P72703.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA16710 ; BAA16710 ; BAA16710 .
GeneIDi 953327.
KEGGi syn:sll0228.
syy:SYNGTS_0134.
syz:MYO_11320.
PATRICi 23837138. VBISynSp132158_0144.

Phylogenomic databases

eggNOGi COG0010.
KOi K01480.
OMAi LIPVPYD.
OrthoDBi EOG6SR905.
PhylomeDBi P72703.

Family and domain databases

Gene3Di 3.40.800.10. 1 hit.
InterProi IPR005925. Agmatinase-rel.
IPR006035. Ureohydrolase.
IPR023696. Ureohydrolase_domain.
IPR020855. Ureohydrolase_Mn_BS.
[Graphical view ]
PANTHERi PTHR11358. PTHR11358. 1 hit.
Pfami PF00491. Arginase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036979. Arginase. 1 hit.
TIGRFAMsi TIGR01230. agmatinase. 1 hit.
PROSITEi PS01053. ARGINASE_1. 1 hit.
PS51409. ARGINASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.
  2. "Arginine catabolism in the cyanobacterium Synechocystis sp. strain PCC 6803 involves the urea cycle and arginase pathway."
    Quintero M.J., Muro-Pastor A.M., Herrero A., Flores E.
    J. Bacteriol. 182:1008-1015(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION.

Entry informationi

Entry nameiSPEB1_SYNY3
AccessioniPrimary (citable) accession number: P72703
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: February 1, 1997
Last modified: July 9, 2014
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Was originally annotated as an arginase by the genome sequencing project.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

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