SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P72687

- RIMP_SYNY3

UniProt

P72687 - RIMP_SYNY3

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Ribosome maturation factor RimP
Gene
rimP, slr0742
Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Required for maturation of 30S ribosomal subunits By similarity.UniRule annotation

GO - Biological processi

  1. ribosome biogenesis Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Ribosome biogenesis

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome maturation factor RimP
Gene namesi
Name:rimP
Ordered Locus Names:slr0742
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

Cytoplasm Reviewed prediction UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 151151Ribosome maturation factor RimPUniRule annotation
PRO_0000181942Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiP72687. 1 interaction.
STRINGi1148.slr0742.

Structurei

3D structure databases

ProteinModelPortaliP72687.

Family & Domainsi

Sequence similaritiesi

Belongs to the RimP family.

Phylogenomic databases

eggNOGiCOG0779.
KOiK09748.
OMAiEDCERMS.
OrthoDBiEOG6NSGP3.
PhylomeDBiP72687.

Family and domain databases

Gene3Di2.30.30.180. 1 hit.
3.30.300.70. 1 hit.
HAMAPiMF_01077. RimP.
InterProiIPR003728. Ribosome_maturation_RimP.
IPR028998. RimP_C.
IPR028989. RimP_N.
[Graphical view]
PfamiPF02576. DUF150. 1 hit.
[Graphical view]
SUPFAMiSSF74942. SSF74942. 1 hit.
SSF75420. SSF75420. 1 hit.

Sequencei

Sequence statusi: Complete.

P72687-1 [UniParc]FASTAAdd to Basket

« Hide

MTHPVIPDIL ALAQPIAEDL GLEVTDAVFQ TNKRPPVLRI DIRNLQQDTS    50
LNDCEAFSRS FEAQLEESSL IASAYVLEVS SPGISPYLAT ERDFIAFKGF 100
EVVVTSDNPH QGQSQWQGSL QGRDGEAVYL SIRGRTVAIP LTVGLTVRLP 150
H 151
Length:151
Mass (Da):16,560
Last modified:August 22, 2003 - v2
Checksum:i6087BAE6BE147AE7
GO

Sequence cautioni

The sequence BAA16694.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA16694.1. Different initiation.
PIRiS74542.
RefSeqiNP_440014.1. NC_000911.1.
YP_005650070.1. NC_017277.1.
YP_007449897.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA16694; BAA16694; BAA16694.
GeneIDi953240.
KEGGisyn:slr0742.
syy:SYNGTS_0117.
syz:MYO_11160.
PATRICi23837102. VBISynSp132158_0126.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA16694.1 . Different initiation.
PIRi S74542.
RefSeqi NP_440014.1. NC_000911.1.
YP_005650070.1. NC_017277.1.
YP_007449897.1. NC_020286.1.

3D structure databases

ProteinModelPortali P72687.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P72687. 1 interaction.
STRINGi 1148.slr0742.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA16694 ; BAA16694 ; BAA16694 .
GeneIDi 953240.
KEGGi syn:slr0742.
syy:SYNGTS_0117.
syz:MYO_11160.
PATRICi 23837102. VBISynSp132158_0126.

Phylogenomic databases

eggNOGi COG0779.
KOi K09748.
OMAi EDCERMS.
OrthoDBi EOG6NSGP3.
PhylomeDBi P72687.

Family and domain databases

Gene3Di 2.30.30.180. 1 hit.
3.30.300.70. 1 hit.
HAMAPi MF_01077. RimP.
InterProi IPR003728. Ribosome_maturation_RimP.
IPR028998. RimP_C.
IPR028989. RimP_N.
[Graphical view ]
Pfami PF02576. DUF150. 1 hit.
[Graphical view ]
SUPFAMi SSF74942. SSF74942. 1 hit.
SSF75420. SSF75420. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiRIMP_SYNY3
AccessioniPrimary (citable) accession number: P72687
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: August 22, 2003
Last modified: July 9, 2014
This is version 81 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi