P72687 (RIMP_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribosome maturation factor RimP

Gene names

Name:	rimP
Ordered Locus Names:	slr0742

Organism

Synechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]

Taxonomic identifier

1111708 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechocystis › Synechocystis sp. PCC 6803

Protein attributes

Sequence length	151 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for maturation of 30S ribosomal subunits By similarity. HAMAP-Rule MF_01077
Subcellular location	Cytoplasm Potential HAMAP-Rule MF_01077.
Sequence similarities	Belongs to the RimP family.
Sequence caution	The sequence BAA16694.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Biological process	Ribosome biogenesis
Cellular component	Cytoplasm
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	ribosomal small subunit biogenesis Inferred from electronic annotation. Source: HAMAP
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 151	151	Ribosome maturation factor RimP HAMAP-Rule MF_01077		PRO_0000181942

Sequences

	Sequence		Length	Mass (Da)
	P72687 [UniParc]. Last modified August 22, 2003. Version 2. Checksum: 6087BAE6BE147AE7	FASTA	151	16,560
	10 20 30 40 50 60 MTHPVIPDIL ALAQPIAEDL GLEVTDAVFQ TNKRPPVLRI DIRNLQQDTS LNDCEAFSRS 70 80 90 100 110 120 FEAQLEESSL IASAYVLEVS SPGISPYLAT ERDFIAFKGF EVVVTSDNPH QGQSQWQGSL 130 140 150 QGRDGEAVYL SIRGRTVAIP LTVGLTVRLP H

References

[1]

"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions." Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S. DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000022 Genomic DNA. Translation: BAA16694.1. Different initiation.
PIR	S74542.
RefSeq	NP_440014.1. NC_000911.1. YP_005650070.1. NC_017277.1. YP_007449897.1. NC_020286.1.
3D structure databases
ProteinModelPortal	P72687.
ModBase	Search...
Protein-protein interaction databases
IntAct	P72687. 1 interaction.
STRING	1148.slr0742.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAA16694; BAA16694; BAA16694.
GeneID	12253903. 14615538. 953240.
KEGG	syn:slr0742. syy:SYNGTS_0117.
PATRIC	23837102. VBISynSp132158_0126.
Phylogenomic databases
eggNOG	COG0779.
KO	K09748.
OMA	AYVLEIS.
ProtClustDB	PRK00092.
Family and domain databases
HAMAP	MF_01077. RimP.
InterPro	IPR003728. Ribosome_maturation_RimP. [Graphical view]
Pfam	PF02576. DUF150. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RIMP_SYNY3

Accession

Primary (citable) accession number: P72687

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 30, 2000
Last sequence update:	August 22, 2003
Last modified:	May 1, 2013
This is version 72 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program