Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P72623 (GLGA2_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable glycogen synthase 2

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase 2
Gene names
Name:glgA2
Ordered Locus Names:sll1393
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length491 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 491491Probable glycogen synthase 2 HAMAP-Rule MF_00484
PRO_0000188656

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
P72623 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 9AE25BB6D0CF4B5A

FASTA49156,225
        10         20         30         40         50         60 
MYIVQIASEC APVIKAGGLG DVIYGLSREL ELRGHCVELI LPMYDCMRYD HIWGLHDAYR 

        70         80         90        100        110        120 
NLEVPWYGSS IFCDVFCGWV HGRLCFFIQP KSSDNFFNRG HYYGALDDHM RFAFFSKAAM 

       130        140        150        160        170        180 
EFLLRSNKRP DIIHCHDWQT GLVPVLLYEI YRFHGMDHQR VCYTIHNFKH QGIAGANILH 

       190        200        210        220        230        240 
ATGLNNDSYY FSYDRLQDNF NPNAINFMKG GIVYSNYVNT VSPHHAWEAR FSDISCGLGH 

       250        260        270        280        290        300 
TLEIHQQKFG GILNGLDYEV WNPEIDPLLA SNFSVKTFGD KAKNKQALRE RLLLETDDKK 

       310        320        330        340        350        360 
PMLCFIGRLD GQKGVHLVHH SIYYALSQGA QFVLLGSATE PNLSKWFWHE KQHLNDNPNV 

       370        380        390        400        410        420 
HLELGFDEEL AHLIYGAADI IVVPSNYEPC GLTQMIGLRY GAVPVVRGVG GLVNTVFDRD 

       430        440        450        460        470        480 
YDQNHPPEKR NGFVFYQPDE YALETALSRA IALYKDDPVA FKTLALQGMA YDYSWNKPGL 

       490 
QYVEAYEYIR A 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA16625.1.
PIRS74473.
RefSeqNP_439945.1. NC_000911.1.
YP_005650000.1. NC_017277.1.
YP_007449828.1. NC_020286.1.

3D structure databases

ProteinModelPortalP72623.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP72623. 6 interactions.
STRING1148.sll1393.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Proteomic databases

PaxDbP72623.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA16625; BAA16625; BAA16625.
GeneID12253753.
14615469.
952566.
KEGGsyn:sll1393.
syy:SYNGTS_0047.
syz:MYO_1470.
PATRIC23836954. VBISynSp132158_0052.

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAWGLHEAY.
OrthoDBEOG6JTC6Z.
PhylomeDBP72623.
ProtClustDBPRK00654.

Enzyme and pathway databases

UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA2_SYNY3
AccessionPrimary (citable) accession number: P72623
Entry history
Integrated into UniProtKB/Swiss-Prot: November 16, 2001
Last sequence update: February 1, 1997
Last modified: April 16, 2014
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways