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P72583

- YC53L_SYNY3

UniProt

P72583 - YC53L_SYNY3

Protein

Ycf53-like protein

Gene

sll0558

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 76 (01 Oct 2014)
      Sequence version 1 (01 Feb 1997)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ycf53-like protein
    Gene namesi
    Ordered Locus Names:sll0558
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 233233Ycf53-like proteinPRO_0000217384Add
    BLAST

    Proteomic databases

    PaxDbiP72583.

    Interactioni

    Protein-protein interaction databases

    IntActiP72583. 6 interactions.
    STRINGi1148.sll0558.

    Structurei

    Secondary structure

    1
    233
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi2 – 1413
    Turni17 – 193
    Helixi20 – 289
    Helixi31 – 4515
    Helixi53 – 6412
    Helixi68 – 7710
    Helixi94 – 1018
    Helixi105 – 12016
    Helixi132 – 1354
    Helixi140 – 15213
    Turni153 – 1564
    Helixi160 – 16910
    Turni170 – 1723
    Helixi174 – 1818
    Helixi217 – 2237
    Helixi227 – 2304

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1Y6IX-ray1.78A1-233[»]
    ProteinModelPortaliP72583.
    SMRiP72583. Positions 1-233.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP72583.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ycf53 family.Curated

    Phylogenomic databases

    eggNOGiNOG08265.
    OMAiRKWLYFT.
    OrthoDBiEOG6FBWWT.
    PhylomeDBiP72583.

    Family and domain databases

    InterProiIPR016024. ARM-type_fold.
    IPR008629. GUN4-like.
    [Graphical view]
    PfamiPF05419. GUN4. 1 hit.
    [Graphical view]
    SUPFAMiSSF48371. SSF48371. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P72583-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDNLTELSQ QLHDASEKKQ LTAIAALAEM GEGGQGILLD YLAKNVPLEK    50
    PVLAVGNVYQ TLRNLEQETI TTQLQRNYPT GIFPLQSAQG IDYLPLQEAL 100
    GSQDFETADE ITRDKLCELA GPGASQRQWL YFTEVEKFPA LDLHTINALW 150
    WLHSNGNFGF SVQRRLWLAS GKEFTKLWPK IGWKSGNVWT RWPKGFTWDL 200
    SAPQGHLPLL NQLRGVRVAE SLYRHPVWSQ YGW 233
    Length:233
    Mass (Da):26,465
    Last modified:February 1, 1997 - v1
    Checksum:iDE36B048AC83757C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA16582.1.
    PIRiS74430.
    RefSeqiNP_439902.1. NC_000911.1.
    YP_005649957.1. NC_017277.1.
    YP_007449785.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA16582; BAA16582; BAA16582.
    GeneIDi951870.
    KEGGisyn:sll0558.
    syy:SYNGTS_0004.
    syz:MYO_140.
    PATRICi23836858. VBISynSp132158_0004.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA16582.1 .
    PIRi S74430.
    RefSeqi NP_439902.1. NC_000911.1.
    YP_005649957.1. NC_017277.1.
    YP_007449785.1. NC_020286.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1Y6I X-ray 1.78 A 1-233 [» ]
    ProteinModelPortali P72583.
    SMRi P72583. Positions 1-233.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi P72583. 6 interactions.
    STRINGi 1148.sll0558.

    Proteomic databases

    PaxDbi P72583.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA16582 ; BAA16582 ; BAA16582 .
    GeneIDi 951870.
    KEGGi syn:sll0558.
    syy:SYNGTS_0004.
    syz:MYO_140.
    PATRICi 23836858. VBISynSp132158_0004.

    Phylogenomic databases

    eggNOGi NOG08265.
    OMAi RKWLYFT.
    OrthoDBi EOG6FBWWT.
    PhylomeDBi P72583.

    Miscellaneous databases

    EvolutionaryTracei P72583.

    Family and domain databases

    InterProi IPR016024. ARM-type_fold.
    IPR008629. GUN4-like.
    [Graphical view ]
    Pfami PF05419. GUN4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48371. SSF48371. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / Kazusa.

    Entry informationi

    Entry nameiYC53L_SYNY3
    AccessioniPrimary (citable) accession number: P72583
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 15, 1999
    Last sequence update: February 1, 1997
    Last modified: October 1, 2014
    This is version 76 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families
    3. Synechocystis PCC 6803
      Synechocystis (strain PCC 6803): entries and gene names

    External Data

    Dasty 3