P72583 (YC53L_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ycf53-like protein

Gene names

Ordered Locus Names:

sll0558

Organism

Synechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]

Taxonomic identifier

1111708 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechocystis › Synechocystis sp. PCC 6803

Protein attributes

Sequence length	233 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ycf53 family.

Ontologies

Keywords
Technical term	3D-structure Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 233

233

Ycf53-like protein

PRO_0000217384

Secondary structure

1

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233

Helix Strand Turn

Details...

Helix

2 – 14

13

Turn

17 – 19

3

Helix

20 – 28

9

Helix

31 – 45

15

Helix

53 – 64

12

Helix

68 – 77

10

Helix

94 – 101

8

Helix

105 – 120

16

Helix

132 – 135

4

Helix

140 – 152

13

Turn

153 – 156

4

Helix

160 – 169

10

Turn

170 – 172

3

Helix

174 – 181

8

Helix

217 – 223

7

Helix

227 – 230

4

Sequences

	Sequence		Length	Mass (Da)
	P72583 [UniParc]. Last modified February 1, 1997. Version 1. Checksum: DE36B048AC83757C	FASTA	233	26,465
	10 20 30 40 50 60 MSDNLTELSQ QLHDASEKKQ LTAIAALAEM GEGGQGILLD YLAKNVPLEK PVLAVGNVYQ 70 80 90 100 110 120 TLRNLEQETI TTQLQRNYPT GIFPLQSAQG IDYLPLQEAL GSQDFETADE ITRDKLCELA 130 140 150 160 170 180 GPGASQRQWL YFTEVEKFPA LDLHTINALW WLHSNGNFGF SVQRRLWLAS GKEFTKLWPK 190 200 210 220 230 IGWKSGNVWT RWPKGFTWDL SAPQGHLPLL NQLRGVRVAE SLYRHPVWSQ YGW

References

[1]

"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions." Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S. DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PCC 6803 / Kazusa.

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Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BA000022 Genomic DNA. Translation: BAA16582.1.

PIR

S74430.

RefSeq

NP_439902.1. NC_000911.1.
YP_005649957.1. NC_017277.1.
YP_007449785.1. NC_020286.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1Y6I	X-ray	1.78	A	1-233	[»]

ProteinModelPortal

P72583.

SMR

P72583. Positions 1-233.

ModBase

Search...

Protein-protein interaction databases

IntAct

P72583. 6 interactions.

STRING

1148.sll0558.

Proteomic databases

PaxDb

P72583.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

BAA16582; BAA16582; BAA16582.

GeneID

12255292.
14615426.
951870.

KEGG

syn:sll0558.
syy:SYNGTS_0004.

PATRIC

23836858. VBISynSp132158_0004.

Phylogenomic databases

eggNOG

NOG08265.

OMA

WLYFTEV.

ProtClustDB

CLSK2301763.

Family and domain databases

InterPro

IPR016024. ARM-type_fold.
IPR008629. GUN4-like.
[Graphical view]

Pfam

PF05419. GUN4. 1 hit.
[Graphical view]

SUPFAM

SSF48371. ARM-type_fold. 1 hit.

ProtoNet

Search...

Other

EvolutionaryTrace

P72583.

Entry information

Entry name

YC53L_SYNY3

Accession

Primary (citable) accession number: P72583

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 15, 1999
Last sequence update:	February 1, 1997
Last modified:	May 1, 2013
This is version 69 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program