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P72583 (YC53L_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ycf53-like protein
Gene names
Ordered Locus Names:sll0558
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length233 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ycf53 family.

Ontologies

Keywords
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 233233Ycf53-like protein
PRO_0000217384

Secondary structure

.............................. 233
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P72583 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: DE36B048AC83757C

FASTA23326,465
        10         20         30         40         50         60 
MSDNLTELSQ QLHDASEKKQ LTAIAALAEM GEGGQGILLD YLAKNVPLEK PVLAVGNVYQ 

        70         80         90        100        110        120 
TLRNLEQETI TTQLQRNYPT GIFPLQSAQG IDYLPLQEAL GSQDFETADE ITRDKLCELA 

       130        140        150        160        170        180 
GPGASQRQWL YFTEVEKFPA LDLHTINALW WLHSNGNFGF SVQRRLWLAS GKEFTKLWPK 

       190        200        210        220        230 
IGWKSGNVWT RWPKGFTWDL SAPQGHLPLL NQLRGVRVAE SLYRHPVWSQ YGW 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA16582.1.
PIRS74430.
RefSeqNP_439902.1. NC_000911.1.
YP_005649957.1. NC_017277.1.
YP_007449785.1. NC_020286.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1Y6IX-ray1.78A1-233[»]
ProteinModelPortalP72583.
SMRP72583. Positions 1-233.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActP72583. 6 interactions.
STRING1148.sll0558.

Proteomic databases

PaxDbP72583.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA16582; BAA16582; BAA16582.
GeneID951870.
KEGGsyn:sll0558.
syy:SYNGTS_0004.
syz:MYO_140.
PATRIC23836858. VBISynSp132158_0004.

Phylogenomic databases

eggNOGNOG08265.
OMARKWLYFT.
OrthoDBEOG6FBWWT.
PhylomeDBP72583.

Family and domain databases

InterProIPR016024. ARM-type_fold.
IPR008629. GUN4-like.
[Graphical view]
PfamPF05419. GUN4. 1 hit.
[Graphical view]
SUPFAMSSF48371. SSF48371. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceP72583.

Entry information

Entry nameYC53L_SYNY3
AccessionPrimary (citable) accession number: P72583
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1999
Last sequence update: February 1, 1997
Last modified: July 9, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references