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Protein
Submitted name:

RegR

Gene

regR

Organism
Streptococcus pneumoniae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RegRImported
Submitted name:
Sugar binding transcriptional regulator RegRImported
Gene namesi
Name:regRImported
ORF Names:ERS020873_00143Imported
OrganismiStreptococcus pneumoniaeImported
Taxonomic identifieri1313 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000045394 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi171101.spr0298.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 60HTH lacI-type DNA-bindingInterPro annotationAdd BLAST56

Phylogenomic databases

eggNOGiENOG4108M60. Bacteria.
COG1609. LUCA.

Family and domain databases

CDDicd01392. HTH_LacI. 1 hit.
Gene3Di1.10.260.40. 1 hit.
InterProiIPR000843. HTH_LacI.
IPR010982. Lambda_DNA-bd_dom.
IPR001761. Peripla_BP/Lac1_sug-bd_dom.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
PF00532. Peripla_BP_1. 1 hit.
[Graphical view]
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS50932. HTH_LACI_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P72489-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKKLTIKDI AEMAQTSKTT VSFYLNGKYE KMSQETREKI EKVIHETNYK
60 70 80 90 100
PSIVARSLNS KRTKLIGVLI GDITNSFSNQ IVKGIEDIAS QNGYQVMIGN
110 120 130 140 150
SNYSQESEDR YIESMLLLGV DGFIIQPTSN FRKYSRIIDE KKKKMVFFDS
160 170 180 190 200
QLYEHRTSWV KTNNYDAVYD MTQSCIEKGY EYFLLITADT SRLSTRIERA
210 220 230 240 250
SGFVDALTDA NMRHASLTIE DKHTNLEQIK EFLQKEIDPD EKTLVFIPNC
260 270 280 290 300
WALPLVFTVI KELNYNLPQV GLIGFDNTEW TCFSSPSVST LVQPSFEEGQ
310 320 330
QATKILIDQI EGRNQEERQQ VLDCSVNWKE STF
Length:333
Mass (Da):38,359
Last modified:February 1, 1997 - v1
Checksum:i5D7496573B9315F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z79691 Genomic DNA. Translation: CAB01925.1.
CQUL01000001 Genomic DNA. Translation: CNY79624.1.
RefSeqiWP_000412456.1. NZ_LQQG01000034.1.

Genome annotation databases

EnsemblBacteriaiCNY79624; CNY79624; ERS020873_00143.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z79691 Genomic DNA. Translation: CAB01925.1.
CQUL01000001 Genomic DNA. Translation: CNY79624.1.
RefSeqiWP_000412456.1. NZ_LQQG01000034.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi171101.spr0298.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCNY79624; CNY79624; ERS020873_00143.

Phylogenomic databases

eggNOGiENOG4108M60. Bacteria.
COG1609. LUCA.

Family and domain databases

CDDicd01392. HTH_LacI. 1 hit.
Gene3Di1.10.260.40. 1 hit.
InterProiIPR000843. HTH_LacI.
IPR010982. Lambda_DNA-bd_dom.
IPR001761. Peripla_BP/Lac1_sug-bd_dom.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
PF00532. Peripla_BP_1. 1 hit.
[Graphical view]
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS50932. HTH_LACI_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP72489_STREE
AccessioniPrimary (citable) accession number: P72489
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: November 30, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.