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Protein
Submitted name:

RedZ protein

Gene

redZ

Organism
Streptomyces coelicolor
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RedZ proteinImported
Gene namesi
Name:redZImported
OrganismiStreptomyces coelicolorImported
Taxonomic identifieri1902 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5881.

Structurei

3D structure databases

ProteinModelPortaliP72402.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 115Response regulatoryInterPro annotationAdd BLAST112
Domaini139 – 204HTH luxR-type DNA-bindingInterPro annotationAdd BLAST66

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG41067SM. Bacteria.
ENOG410XUEY. LUCA.
HOGENOMiHOG000034813.
PhylomeDBiP72402.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P72402-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTRVLVCCD RVILGEGIRA LLERHDMKVQ VETTQRGSLA TAAETGPDIL
60 70 80 90 100
VGVAPLFTMD SIDKLTELAR LGKTLLLTKP ENTHRAFEAL RVGVRAVLSA
110 120 130 140 150
ETSVEELVHV IRTITEVNAI IAPEEAQEAL TRYWRSKAPK NLRPELTPRE
160 170 180 190 200
TEVLLLLTQG KTNTEMAATL SVSPTTVRSH VHRILRKLGA ATRAQAVAIA
210
YESGLLGICP GYGTPAR
Length:217
Mass (Da):23,653
Last modified:February 1, 1997 - v1
Checksum:i0C2D036BC1464A54
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y07902 Genomic DNA. Translation: CAA69209.1.
PIRiT42053.
RefSeqiNP_733677.1. NC_003888.3.

Genome annotation databases

GeneIDi1101323.
KEGGisco:SCO5881.
PATRICi23741666. VBIStrCoe124346_5980.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y07902 Genomic DNA. Translation: CAA69209.1.
PIRiT42053.
RefSeqiNP_733677.1. NC_003888.3.

3D structure databases

ProteinModelPortaliP72402.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO5881.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1101323.
KEGGisco:SCO5881.
PATRICi23741666. VBIStrCoe124346_5980.

Phylogenomic databases

eggNOGiENOG41067SM. Bacteria.
ENOG410XUEY. LUCA.
HOGENOMiHOG000034813.
PhylomeDBiP72402.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP72402_STRCH
AccessioniPrimary (citable) accession number: P72402
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: November 30, 2016
This is version 126 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.