P72325 (P72325_RHOSO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2,3-dihydroxybiphenyl 1,2-dioxygenase EMBL BAA18940.1

Submitted name:
Ring cleavage dioxygenase EMBL BAA11181.1

Gene names

Name:

etbC EMBL BAA11181.1

Organism

Rhodococcus sp. EMBL BAA11181.1

Taxonomic identifier

1831 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	305 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Fe2+ ion By similarity. RuleBase RU000683
Sequence similarities	Belongs to the extradiol ring-cleavage dioxygenase family. RuleBase RU000683

Ontologies

Keywords
Biological process	Aromatic hydrocarbons catabolism RuleBase RU000683
Ligand	Iron RuleBase RU000683
Molecular function	Dioxygenase RuleBase RU000683 EMBL BAA11181.1 Oxidoreductase
Gene Ontology (GO)
Biological process	aromatic compound catabolic process Inferred from electronic annotation. Source: UniProtKB-KW xenobiotic catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	ferrous iron binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	P72325 [UniParc]. Last modified February 1, 1997. Version 1. Checksum: 38DDA228AA221012	FASTA	305	34,027
	10 20 30 40 50 60 MAKVTELGYL GLSVSNLDAW RDYAAGIMGM QVVDDGEDDR IYLRMDRWHH RIVLHADGSD 70 80 90 100 110 120 DLAYIGWRVA GPVELDELAE QLKNAGIPFE VASDADAAER RVLGLVKLHD PGGNPTEIFY 130 140 150 160 170 180 GPQVDTSSPF HPGRPMFGKF VTEGQGLGHI IIREDDVEEA TRFYRLLGLE GAVEYKFALP 190 200 210 220 230 240 NGAVGTPVFM HCNDRHHSLA FGVGPMDKRI NHLMIEYTHL DDLGYAHDLV RQQKIDVTLQ 250 260 270 280 290 300 IGKHSNDEAL TFYCANPSGW LWEPGWGSRP APAQQEHYLR DIFGHDNEVE GYGLDIPLKG LDIPA

References

[1]

"The bphDEF meta-cleavage pathway genes involved in biphenyl/polychlorinated biphenyl degradation are located on a linear plasmid and separated from the initial bphACB genes in Rhodococcus sp. strain RHA1." Masai E., Sugiyama K., Iwashita N., Shimizu S., Hauschild J.E., Hatta T., Kimbara K., Yano K., Fukuda M. Gene 187:141-149(1997) [PubMed: 9073078] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: RHA1 EMBL BAA18940.1.

[2]

"Identification and Cloning of an Alternative 2,3-Dihydroxybiphenyl 1,2-Dioxygenase in Rhodococcus sp. RHA1." Hauschild J.E., Masai E., Sugiyama K., Hatta T., Kimbara K., Fukuda M., Yano K. Appl. Environ. Microbiol. 62:2940-2946(1996) [PubMed: 8702287] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: RHA1 EMBL BAA11181.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	D76438 Genomic DNA. Translation: BAA11181.1. D78322 Genomic DNA. Translation: BAA18940.1.
3D structure databases
HSSP	HSSP built from PDB template 1DHY based on UniProtKB P17297.
ProteinModelPortal	P72325.
SMR	P72325. Positions 2-299.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR017626. DiOHbiphenyl_dOase. IPR004360. Glyas_Fos-R_dOase. IPR000486. Xdiol_ring_cleave_dOase_1/2. [Graphical view]
Pfam	PF00903. Glyoxalase. 1 hit. [Graphical view]
TIGRFAMs	TIGR03213. 23dbph12diox. 1 hit.
PROSITE	PS00082. EXTRADIOL_DIOXYGENAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

P72325_RHOSO

Accession

Primary (citable) accession number: P72325
Secondary accession number(s): O08063

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 1997
Last sequence update:	February 1, 1997
Last modified:	November 16, 2011
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)