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Protein
Submitted name:

Nitrilase regulator

Gene

nitR

Organism
Rhodococcus rhodochrous
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Nitrilase regulatorImported
Gene namesi
Name:nitRImported
OrganismiRhodococcus rhodochrousImported
Taxonomic identifieri1829 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus

Structurei

3D structure databases

ProteinModelPortaliP72312.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini209 – 310HTH araC/xylS-type DNA-bindingInterPro annotationAdd BLAST102

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
InterProiIPR003313. AraC-bd.
IPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR018062. HTH_AraC-typ_CS.
[Graphical view]
PfamiPF14525. AraC_binding_2. 1 hit.
PF12833. HTH_18. 1 hit.
[Graphical view]
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00041. HTH_ARAC_FAMILY_1. 1 hit.
PS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P72312-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTFFSSDQV SAPDRVALWH DVICRSYVPL NITLTSEQPF IGTVSTGNLG
60 70 80 90 100
TVRIATSSSL PQQITRTRRL IRQDEREYLM VGVQSAGHAL VQQHGRTARV
110 120 130 140 150
GRGGLVFWDT RHPYDILFPT DWRMSVFQFP RYSFGFTEDF IGRMTAVNVG
160 170 180 190 200
GDRGIGRVVS SFMTSINDAT DAGDLAEVAS LHNSAVDLLS AAIRTELADQ
210 220 230 240 250
AAASDGLLEC VLAYIRQNLA DPNLCASQIA AEHNVSVRTL HRLFSATGQG
260 270 280 290 300
VAEHIRNLRL ERIKTELADP TSRRYTISAL ARKWGFLDPS TFSRAFKDAY
310
GITAREWAAS ASASPTEVS
Length:319
Mass (Da):35,101
Last modified:February 1, 1997 - v1
Checksum:i1FB3F8A899513C6B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D67026 Genomic DNA. Translation: BAA11038.1.
PIRiJC6117.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D67026 Genomic DNA. Translation: BAA11038.1.
PIRiJC6117.

3D structure databases

ProteinModelPortaliP72312.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
InterProiIPR003313. AraC-bd.
IPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR018062. HTH_AraC-typ_CS.
[Graphical view]
PfamiPF14525. AraC_binding_2. 1 hit.
PF12833. HTH_18. 1 hit.
[Graphical view]
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00041. HTH_ARAC_FAMILY_1. 1 hit.
PS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP72312_RHORH
AccessioniPrimary (citable) accession number: P72312
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.