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Protein

Beta-xylanase

Gene

xynC

Organism
Prevotella ruminicola (Bacteroides ruminicola)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:xynCImported
OrganismiPrevotella ruminicola (Bacteroides ruminicola)Imported
Taxonomic identifieri839 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPrevotellaceaePrevotella

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500416126221 – 560Beta-xylanaseSequence analysisAdd BLAST540

Structurei

3D structure databases

ProteinModelPortaliP72234.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini41 – 556GH10 (glycosyl hydrolase family 10)InterPro annotationAdd BLAST516

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02018. CBM_4_9. 1 hit.
PF00331. Glyco_hydro_10. 2 hits.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 2 hits.
PROSITEiPS51760. GH10_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P72234-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVLNSLLYV AAGLSLTACA DQDIPGFTTD EPAEVIAQDE INSYGTLKSY
60 70 80 90 100
VNRDKYPQFV MAGAVNAEQF NQVGQLYSLA KANYDEVVTG NAFKYASVVG
110 120 130 140 150
SDGTLNTATV ESFVNNATNA GLTVFGHTLC WHSQQQVAYL NSLITDPNAT
160 170 180 190 200
KHVLYIHMGE PKTNNWDREL YVNPTTELQS GKTYTLKLRV KTSAACDVTV
210 220 230 240 250
WPQGDATQYW PTPSFKSTTE WTTVAQAFEA KSALKQLRFE LGTLGGDIWM
260 270 280 290 300
DDVQLLDPDG NNLIANGTFE ENADGWTKPS WHEYEIKTVA DPDQEGGGGG
310 320 330 340 350
MTEEVKKDTL TWALNNFISG MMKACNGKVK AWDVVNEPMS DAAPAELKTA
360 370 380 390 400
GRDGDPKKCF FWQDHLGKDY ARLAVKLARK AASDSVQLKL FINDYNLEAA
410 420 430 440 450
YNKNAKLQGL IDMIKYWESD GVTKIDGIGS QMHVTYSMNP KTQAANEEAY
460 470 480 490 500
VNHLKMMAAT GKLVRISELD MGIADAEGNT INTADVTEEQ QQLMAQYYKF
510 520 530 540 550
IVSRYFEIIP ANQQYGICNW GLQDSPKGSG WRADEPIGLW DANWVRKPAY
560
VGFCEGLKQE
Length:560
Mass (Da):62,030
Last modified:February 1, 1997 - v1
Checksum:i4B4BBC59BF3987D0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z79595 Genomic DNA. Translation: CAB01855.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z79595 Genomic DNA. Translation: CAB01855.1.

3D structure databases

ProteinModelPortaliP72234.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR003305. CenC_carb-bd.
IPR008979. Galactose-bd-like.
IPR001000. GH10.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02018. CBM_4_9. 1 hit.
PF00331. Glyco_hydro_10. 2 hits.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 2 hits.
PROSITEiPS51760. GH10_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP72234_PRERU
AccessioniPrimary (citable) accession number: P72234
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: April 13, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.