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Protein
Submitted name:

Sulfite-dehydrogenase

Gene
N/A
Organism
Paracoccus denitrificans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei184 – 1841MolybdopterinCombined sources
Binding sitei215 – 2151MolybdopterinCombined sources
Binding sitei219 – 2191MolybdopterinCombined sources
Binding sitei252 – 2521MolybdopterinCombined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Sulfite-dehydrogenaseImported
OrganismiParacoccus denitrificansImported
Taxonomic identifieri266 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeParacoccus

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2XTSX-ray1.33A/C41-430[»]
ProteinModelPortaliP72178.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini122 – 278157Oxidored_molybInterPro annotationAdd
BLAST
Domaini296 – 414119Mo-co_dimerInterPro annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni112 – 1165Molybdopterin bindingCombined sources
Regioni261 – 2655Molybdopterin bindingCombined sources

Family and domain databases

Gene3Di2.60.40.650. 1 hit.
3.90.420.10. 1 hit.
InterProiIPR014756. Ig_E-set.
IPR005066. MoCF_OxRdtse_dimer.
IPR008335. Mopterin_OxRdtase_euk.
IPR000572. OxRdtase_Mopterin-bd_dom.
IPR030835. Sulfite_DH_SoxC.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF03404. Mo-co_dimer. 1 hit.
PF00174. Oxidored_molyb. 1 hit.
[Graphical view]
PRINTSiPR00407. EUMOPTERIN.
SUPFAMiSSF56524. SSF56524. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR04555. sulfite_DH_soxC. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P72178-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKDELTKDGK DAVGTSRRAF LRGGAVAGAG LVAGAGLARA AGTPDPLITE
60 70 80 90 100
IQPWASEFGE AVDAHPYGLP IHFESHVKRQ YVEWLTESPV SSINFTPIHA
110 120 130 140 150
LEGTITPQGC AFERHHSGAI ELSKQDYRLM INGLVEKPLV FTFEDLLRFP
160 170 180 190 200
RTTTTAFCEC AANGGMEWGG AQLEGCQYTQ GMIHNMEYVG VPLSVLLAEA
210 220 230 240 250
GVKPEGKWLY AEGADASSNG RSFPMEKVMD DVMLAFFANG EALRKEHGYP
260 270 280 290 300
ARLVVPGWEG NMWVKWVRRL GIYDKAVESR EETSKYTDLM PDGRARKWTW
310 320 330 340 350
VMDAKSVITS PSPQVPIRHG KGPLVISGLA WSGNGRITRV DVSLDGGKNW
360 370 380 390 400
TTARITGQAL PKALTRFHLD IDWDGSEMLL QSRAVDETGY VQPTKDALRA
410 420 430
IRGRNNVYHN NGIQTWWVKA DGEVENVEIA
Length:430
Mass (Da):47,342
Last modified:February 1, 1997 - v1
Checksum:i8531EF2B43937411
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X79242 Genomic DNA. Translation: CAA55829.1.
PIRiT46965.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X79242 Genomic DNA. Translation: CAA55829.1.
PIRiT46965.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2XTSX-ray1.33A/C41-430[»]
ProteinModelPortaliP72178.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.40.650. 1 hit.
3.90.420.10. 1 hit.
InterProiIPR014756. Ig_E-set.
IPR005066. MoCF_OxRdtse_dimer.
IPR008335. Mopterin_OxRdtase_euk.
IPR000572. OxRdtase_Mopterin-bd_dom.
IPR030835. Sulfite_DH_SoxC.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF03404. Mo-co_dimer. 1 hit.
PF00174. Oxidored_molyb. 1 hit.
[Graphical view]
PRINTSiPR00407. EUMOPTERIN.
SUPFAMiSSF56524. SSF56524. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR04555. sulfite_DH_soxC. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Identification and sequence analysis of the soxB gene essential for sulfur oxidation of Paracoccus denitrificans GB17."
    Wodara C., Kostka S., Egert M., Kelly D.P., Friedrich C.
    J. Bacteriol. 176:6188-6191(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GB17Imported.
  2. "Cloning and characterization of sulfite dehydrogenase, two c-type cytochromes, and a flavoprotein of Paracoccus denitrificans GB17: essential role of sulfite dehydrogenase in lithotrophic sulfur oxidation."
    Wodara C., Bardischewsky F., Friedrich C.G.
    J. Bacteriol. 179:5014-5023(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GB17Imported.
  3. Johansson A.
    Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GB17Imported.
  4. "Structural basis for the oxidation of protein-bound sulfur by the sulfur cycle molybdohemo-enzyme sulfane dehydrogenase SoxCD."
    Zander U., Faust A., Klink B.U., de Sanctis D., Panjikar S., Quentmeier A., Bardischewsky F., Friedrich C.G., Scheidig A.J.
    J. Biol. Chem. 286:8349-8360(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.33 ANGSTROMS) OF 41-430 IN COMPLEX WITH MOLYBDOPTERIN.

Entry informationi

Entry nameiP72178_PARDE
AccessioniPrimary (citable) accession number: P72178
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: May 11, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.