Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ArsR family transcriptional regulator

Gene

Rv2642

Organism
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

  • response to copper ion Source: MTBBASE
  • transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciMTBRV:RV2642-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ArsR family transcriptional regulatorImported
Submitted name:
Possible transcriptional regulatory protein (Probably ArsR-family)Imported
Gene namesi
Ordered Locus Names:Rv2642Imported
ORF Names:LH57_14470Imported
OrganismiMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)Imported
Taxonomic identifieri83332 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
Proteomesi
  • UP000001584 Componenti: Chromosome
  • UP000031768 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi83332.Rv2642.

Structurei

3D structure databases

SMRiP71941. Positions 34-112.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini23 – 12098HTH arsR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH arsR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG41082YX. Bacteria.
COG0640. LUCA.
HOGENOMiHOG000144506.
KOiK03892.
OMAiRVEMDAP.
OrthoDBiEOG6W9X9K.
PhylomeDBiP71941.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR018334. ArsR_HTH.
IPR001845. HTH_ArsR_DNA-bd_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01022. HTH_5. 1 hit.
[Graphical view]
PRINTSiPR00778. HTHARSR.
SMARTiSM00418. HTH_ARSR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS00846. HTH_ARSR_1. 1 hit.
PS50987. HTH_ARSR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P71941-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNLHPLPEV ASCVVAPLVR EPLNPPAAAE MAARFKALAD PVRLQLLSSV
60 70 80 90 100
ASRAGGEACV CDISAGVEVS QPTISHHLKV LRDAGLLTSR RRASWVYYAV
110 120
VPEALTVLSN LLSVHADAAP ALGAPA
Length:126
Mass (Da):13,111
Last modified:February 1, 1997 - v1
Checksum:i18D46A5823278A19
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR15417.1.
AL123456 Genomic DNA. Translation: CCP45440.1.
RefSeqiNP_217158.1. NC_000962.3.
WP_003899407.1. NZ_KK339370.1.

Genome annotation databases

EnsemblBacteriaiAIR15417; AIR15417; LH57_14470.
CCP45440; CCP45440; Rv2642.
GeneIDi887703.
KEGGimtu:Rv2642.
mtv:RVBD_2642.
PATRICi18154469. VBIMycTub87468_2952.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR15417.1.
AL123456 Genomic DNA. Translation: CCP45440.1.
RefSeqiNP_217158.1. NC_000962.3.
WP_003899407.1. NZ_KK339370.1.

3D structure databases

SMRiP71941. Positions 34-112.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi83332.Rv2642.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIR15417; AIR15417; LH57_14470.
CCP45440; CCP45440; Rv2642.
GeneIDi887703.
KEGGimtu:Rv2642.
mtv:RVBD_2642.
PATRICi18154469. VBIMycTub87468_2952.

Phylogenomic databases

eggNOGiENOG41082YX. Bacteria.
COG0640. LUCA.
HOGENOMiHOG000144506.
KOiK03892.
OMAiRVEMDAP.
OrthoDBiEOG6W9X9K.
PhylomeDBiP71941.

Enzyme and pathway databases

BioCyciMTBRV:RV2642-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR018334. ArsR_HTH.
IPR001845. HTH_ArsR_DNA-bd_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01022. HTH_5. 1 hit.
[Graphical view]
PRINTSiPR00778. HTHARSR.
SMARTiSM00418. HTH_ARSR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS00846. HTH_ARSR_1. 1 hit.
PS50987. HTH_ARSR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25618 / H37RvImported and H37RvImported.
  2. "Phylogenetic analysis of Mycobacterial species using whole genome sequences."
    Hazbon M.H., Riojas M.A., Damon A.M., Alalade R.O., Cantwell B.J., Monaco A., King S., Sohrabi A.
    Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27294 / TMC 102 / H37RvImported and H37RvImported.

Entry informationi

Entry nameiP71941_MYCTU
AccessioniPrimary (citable) accession number: P71941
Secondary accession number(s): F2GLL2, I6YDY8
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: April 13, 2016
This is version 120 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.