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P71913 (P71913_MYCTU) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length304 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding212 – 2154ADP PDB 3GO6
Nucleotide binding270 – 2734ADP PDB 3GO6

Sites

Metal binding2361Magnesium; via carbonyl oxygen PDB 3GO6 PDB 3GO7
Metal binding2381Magnesium; via carbonyl oxygen PDB 3GO6 PDB 3GO7
Metal binding2761Magnesium; via carbonyl oxygen PDB 3GO6 PDB 3GO7
Metal binding2791Magnesium; via carbonyl oxygen PDB 3GO6 PDB 3GO7
Metal binding2811Magnesium; via carbonyl oxygen PDB 3GO6 PDB 3GO7
Binding site2371ADP; via carbonyl oxygen PDB 3GO6
Binding site2411ADP; via amide nitrogen PDB 3GO6

Sequences

Sequence LengthMass (Da)Tools
P71913 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: D1990AADD9F1BA7A

FASTA30430,280
        10         20         30         40         50         60 
MANASETNVG PMAPRVCVVG SVNMDLTFVV DALPRPGETV LAASLTRTPG GKGANQAVAA 

        70         80         90        100        110        120 
ARAGAQVQFS GAFGDDPAAA QLRAHLRANA VGLDRTVTVP GPSGTAIIVV DASAENTVLV 

       130        140        150        160        170        180 
APGANAHLTP VPSAVANCDV LLTQLEIPVA TALAAARAAQ SADAVVMVNA SPAGQDRSSL 

       190        200        210        220        230        240 
QDLAAIADVV IANEHEANDW PSPPTHFVIT LGVRGARYVG ADGVFEVPAP TVTPVDTAGA 

       250        260        270        280        290        300 
GDVFAGVLAA NWPRNPGSPA ERLRALRRAC AAGALATLVS GVGDCAPAAA AIDAALRANR 


HNGS 

« Hide

References

« Hide 'large scale' references
[1]"Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence."
Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.M., Harris D.E., Gordon S.V., Eiglmeier K., Gas S., Barry C.E. III, Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T., Connor R., Davies R.M., Devlin K. expand/collapse author list , Feltwell T., Gentles S., Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J., Moule S., Murphy L.D., Oliver S., Osborne J., Quail M.A., Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton S., Squares S., Squares R., Sulston J.E., Taylor K., Whitehead S., Barrell B.G.
Nature 393:537-544(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25618 / H37Rv and H37Rv EMBL CCP45228.1.
[2]"Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv."
Camus J.C., Pryor M.J., Medigue C., Cole S.T.
Microbiology 148:2967-2973(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: H37Rv EMBL CCP45228.1.
[3]"Crystal structure and biochemical characterization of M.tuberculosis ribokinase (Rv2436)."
Masters E.I., Sun Y., Wang Y., Parker W.B., Li R
Submitted (MAR-2009) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.98 ANGSTROMS) OF 2-304 IN COMPLEX WITH ADP AND MAGNESIUM.
[4]"TubercuList--10 years after."
Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
Tuberculosis 91:1-7(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: H37Rv EMBL CCP45228.1.
[5]Lew J.M.
Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: H37Rv EMBL CCP45228.1.
[6]"The Genome Sequence of Mycobacterium tuberculosis H37Rv."
The Broad Institute Genome Sequencing Platform, The Broad Institute Genome Sequencing Center for Infectious Disease
Galagan J., Kreiswirth B., Dobos K., Fortune S., Fitzgerald M., Young S.K., Zeng Q., Gargeya S., Abouelleil A., Alvarado L., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J., Gnerre S., Griggs A., Gujja S., Hansen M. expand/collapse author list , Howarth C., Imamovic A., Larimer J., McCowan C., Murphy C., Pearson M., Poon T., Priest M., Roberts A., Saif S., Shea T., Sykes S., Wortman J., Nusbaum C., Birren B.
Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: H37Rv EMBL AFN50401.1.
[7]"The genome sequence of Mycobacterium tuberculosis H37Rv."
The Broad Institute Genome Sequencing Platform
Galagan J., Kreiswirth B., Dobos K., Fortune S., Fitzgerald M., Young S.K., Zeng Q., Gargeya S., Abouelleil A., Alvarado L., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J., Gnerre S., Griggs A., Gujja S., Hansen M. expand/collapse author list , Howarth C., Imamovic A., Larimer J., McCowan C., Murphy C., Pearson M., Poon T., Priest M., Roberts A., Saif S., Shea T., Sykes S., Wortman J., Nusbaum C., Birren B.
Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25618 / H37Rv.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003248 Genomic DNA. Translation: AFN50401.1.
AL123456 Genomic DNA. Translation: CCP45228.1.
RefSeqNP_216952.1. NC_000962.3.
YP_006515872.1. NC_018143.2.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3GO6X-ray1.98A/B2-304[»]
3GO7X-ray2.50A/B2-304[»]
ProteinModelPortalP71913.
SMRP71913. Positions 13-285.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING83332.Rv2436.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFN50401; AFN50401; RVBD_2436.
CCP45228; CCP45228; Rv2436.
GeneID13319145.
885671.
KEGGmtu:Rv2436.
mtv:RVBD_2436.
PATRIC18154013. VBIMycTub87468_2730.

Phylogenomic databases

KOK00852.
OMALAFYMAH.
ProtClustDBCLSK791851.

Enzyme and pathway databases

BioCycMTBRV:RV2436-MONOMER.

Family and domain databases

InterProIPR011611. PfkB_dom.
IPR002139. Ribokinase.
[Graphical view]
PfamPF00294. PfkB. 1 hit.
[Graphical view]
PRINTSPR00990. RIBOKINASE.
ProtoNetSearch...

Entry information

Entry nameP71913_MYCTU
AccessionPrimary (citable) accession number: P71913
Secondary accession number(s): I6X491
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: April 16, 2014
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)