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P71913

- P71913_MYCTU

UniProt

P71913 - P71913_MYCTU

Protein
Submitted name:

Ribokinase RbsK

Gene

rbsK

Organism
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 86 (01 Oct 2014)
      Sequence version 1 (01 Feb 1997)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi236 – 2361Magnesium; via carbonyl oxygenImported
    Binding sitei237 – 2371ADP; via carbonyl oxygen
    Metal bindingi238 – 2381Magnesium; via carbonyl oxygenImported
    Binding sitei241 – 2411ADP; via amide nitrogen
    Metal bindingi276 – 2761Magnesium; via carbonyl oxygenImported
    Metal bindingi279 – 2791Magnesium; via carbonyl oxygenImported
    Metal bindingi281 – 2811Magnesium; via carbonyl oxygenImported

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi212 – 2154ADP
    Nucleotide bindingi270 – 2734ADP

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. nucleotide binding Source: UniProtKB-KW
    3. ribokinase activity Source: InterPro

    GO - Biological processi

    1. D-ribose metabolic process Source: InterPro

    Keywords - Molecular functioni

    KinaseSAAS annotationImported, Transferase

    Keywords - Ligandi

    MagnesiumImported, Metal-bindingImported, Nucleotide-bindingImported

    Enzyme and pathway databases

    BioCyciMTBRV:RV2436-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribokinase RbsKImported
    Gene namesi
    Name:rbsKImported
    Ordered Locus Names:Rv2436Imported
    ORF Names:P425_02535Imported, RVBD_2436Imported
    OrganismiMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)Imported
    Taxonomic identifieri83332 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
    ProteomesiUP000001584: Chromosome, UP000003123: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi83332.Rv2436.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3GO6X-ray1.98A/B2-304[»]
    3GO7X-ray2.50A/B2-304[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK00852.
    OMAiFEDRIEP.

    Family and domain databases

    Gene3Di3.40.1190.20. 1 hit.
    InterProiIPR011611. PfkB_dom.
    IPR002139. Ribokinase.
    IPR029056. Ribokinase-like.
    [Graphical view]
    PfamiPF00294. PfkB. 1 hit.
    [Graphical view]
    PRINTSiPR00990. RIBOKINASE.
    SUPFAMiSSF53613. SSF53613. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P71913-1 [UniParc]FASTAAdd to Basket

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    MANASETNVG PMAPRVCVVG SVNMDLTFVV DALPRPGETV LAASLTRTPG    50
    GKGANQAVAA ARAGAQVQFS GAFGDDPAAA QLRAHLRANA VGLDRTVTVP 100
    GPSGTAIIVV DASAENTVLV APGANAHLTP VPSAVANCDV LLTQLEIPVA 150
    TALAAARAAQ SADAVVMVNA SPAGQDRSSL QDLAAIADVV IANEHEANDW 200
    PSPPTHFVIT LGVRGARYVG ADGVFEVPAP TVTPVDTAGA GDVFAGVLAA 250
    NWPRNPGSPA ERLRALRRAC AAGALATLVS GVGDCAPAAA AIDAALRANR 300
    HNGS 304
    Length:304
    Mass (Da):30,280
    Last modified:February 1, 1997 - v1
    Checksum:iD1990AADD9F1BA7A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003248 Genomic DNA. Translation: AFN50401.1.
    AL123456 Genomic DNA. Translation: CCP45228.1.
    JLDD01000032 Genomic DNA. Translation: KBJ30762.1.
    RefSeqiNP_216952.1. NC_000962.3.
    YP_006515872.1. NC_018143.2.

    Genome annotation databases

    EnsemblBacteriaiAFN50401; AFN50401; RVBD_2436.
    CCP45228; CCP45228; Rv2436.
    GeneIDi13319145.
    885671.
    KEGGimtu:Rv2436.
    mtv:RVBD_2436.
    PATRICi18154013. VBIMycTub87468_2730.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003248 Genomic DNA. Translation: AFN50401.1 .
    AL123456 Genomic DNA. Translation: CCP45228.1 .
    JLDD01000032 Genomic DNA. Translation: KBJ30762.1 .
    RefSeqi NP_216952.1. NC_000962.3.
    YP_006515872.1. NC_018143.2.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3GO6 X-ray 1.98 A/B 2-304 [» ]
    3GO7 X-ray 2.50 A/B 2-304 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 83332.Rv2436.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFN50401 ; AFN50401 ; RVBD_2436 .
    CCP45228 ; CCP45228 ; Rv2436 .
    GeneIDi 13319145.
    885671.
    KEGGi mtu:Rv2436.
    mtv:RVBD_2436.
    PATRICi 18154013. VBIMycTub87468_2730.

    Phylogenomic databases

    KOi K00852.
    OMAi FEDRIEP.

    Enzyme and pathway databases

    BioCyci MTBRV:RV2436-MONOMER.

    Family and domain databases

    Gene3Di 3.40.1190.20. 1 hit.
    InterProi IPR011611. PfkB_dom.
    IPR002139. Ribokinase.
    IPR029056. Ribokinase-like.
    [Graphical view ]
    Pfami PF00294. PfkB. 1 hit.
    [Graphical view ]
    PRINTSi PR00990. RIBOKINASE.
    SUPFAMi SSF53613. SSF53613. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 25618 / H37RvImported and H37RvImported.
    2. "Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv."
      Camus J.C., Pryor M.J., Medigue C., Cole S.T.
      Microbiology 148:2967-2973(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: H37RvImported.
    3. "Crystal structure and biochemical characterization of M.tuberculosis ribokinase (Rv2436)."
      Masters E.I., Sun Y., Wang Y., Parker W.B., Li R
      Submitted (MAR-2009) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (1.98 ANGSTROMS) OF 2-304 IN COMPLEX WITH ADP AND MAGNESIUM.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: H37RvImported.
    5. Lew J.M.
      Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: H37RvImported.
    6. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 25618 / H37RvImported.
    7. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: H37RvImported.
    8. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: H37RvImported.

    Entry informationi

    Entry nameiP71913_MYCTU
    AccessioniPrimary (citable) accession number: P71913
    Secondary accession number(s): I6X491
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 1, 1997
    Last sequence update: February 1, 1997
    Last modified: October 1, 2014
    This is version 86 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3