Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

AsnC family transcriptional regulator

Gene

Rv2324

Organism
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AsnC family transcriptional regulatorImported
Submitted name:
Probable transcriptional regulatory protein (Probably AsnC-family)Imported
Gene namesi
Ordered Locus Names:Rv2324Imported
ORF Names:LH57_12680Imported
OrganismiMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)Imported
Taxonomic identifieri83332 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
Proteomesi
  • UP000001584 Componenti: Chromosome
  • UP000031768 Componenti: Chromosome

Organism-specific databases

TubercuListiRv2324.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi83332.Rv2324.

Structurei

3D structure databases

SMRiP71888. Positions 4-142.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini4 – 6562HTH asnC-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 3 HTH asnC-type DNA-binding domains.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108ZC3. Bacteria.
COG1522. LUCA.
HOGENOMiHOG000115327.
OMAiCLVANAR.
PhylomeDBiP71888.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.920. 1 hit.
InterProiIPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01037. AsnC_trans_reg. 1 hit.
PF13404. HTH_AsnC-type. 1 hit.
[Graphical view]
PRINTSiPR00033. HTHASNC.
SMARTiSM00344. HTH_ASNC. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiPS50956. HTH_ASNC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P71888-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRLDDTDER ILAELAEHAR ATFAEIGHKV SLSAPAVKRR VDRMLESGVI
60 70 80 90 100
KGFTTVVDRN ALGWNTEAYV QIFCHGRIAP DQLRAAWVNI PEVVSAATVT
110 120 130 140
GTSDAILHVL AHDMRHLEAA LERIRSSADV ERSESTVVLS NLIDRMPP
Length:148
Mass (Da):16,352
Last modified:February 1, 1997 - v1
Checksum:i3239B9B3F8FB81E8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR15083.1.
AL123456 Genomic DNA. Translation: CCP45111.1.
RefSeqiNP_216840.1. NC_000962.3.
WP_003411963.1. NZ_KK339370.1.

Genome annotation databases

EnsemblBacteriaiAIR15083; AIR15083; LH57_12680.
CCP45111; CCP45111; Rv2324.
GeneIDi885060.
KEGGimtu:Rv2324.
mtv:RVBD_2324.
PATRICi18126994. VBIMycTub22151_2606.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR15083.1.
AL123456 Genomic DNA. Translation: CCP45111.1.
RefSeqiNP_216840.1. NC_000962.3.
WP_003411963.1. NZ_KK339370.1.

3D structure databases

SMRiP71888. Positions 4-142.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi83332.Rv2324.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIR15083; AIR15083; LH57_12680.
CCP45111; CCP45111; Rv2324.
GeneIDi885060.
KEGGimtu:Rv2324.
mtv:RVBD_2324.
PATRICi18126994. VBIMycTub22151_2606.

Organism-specific databases

TubercuListiRv2324.

Phylogenomic databases

eggNOGiENOG4108ZC3. Bacteria.
COG1522. LUCA.
HOGENOMiHOG000115327.
OMAiCLVANAR.
PhylomeDBiP71888.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.920. 1 hit.
InterProiIPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01037. AsnC_trans_reg. 1 hit.
PF13404. HTH_AsnC-type. 1 hit.
[Graphical view]
PRINTSiPR00033. HTHASNC.
SMARTiSM00344. HTH_ASNC. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiPS50956. HTH_ASNC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP71888_MYCTU
AccessioniPrimary (citable) accession number: P71888
Secondary accession number(s): F2GIS3, I6X3X3, Q7D7B5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 128 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.