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Protein
Submitted name:

Probable short-chain type dehydrogenase/reductase

Gene

Rv3548c

Organism
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciMTBRV:RV3548C-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable short-chain type dehydrogenase/reductaseImported
Submitted name:
Short-chain dehydrogenaseImported
Gene namesi
Ordered Locus Names:Rv3548cImported
ORF Names:LH57_19355Imported
OrganismiMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)Imported
Taxonomic identifieri83332 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
Proteomesi
  • UP000001584 Componenti: Chromosome
  • UP000031768 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi83332.Rv3548c.

Family & Domainsi

Sequence similaritiesi

Belongs to the short-chain dehydrogenases/reductases (SDR) family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105KF3. Bacteria.
COG1028. LUCA.
OMAiVINDIGV.
OrthoDBiEOG6N3CR8.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 4 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P71853-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLVDGRVVI VTGAGGGIGR AHALAFAAEG ARVVVNDIGV GLDGSPASGG
60 70 80 90 100
SAAQDVVDEI LAAGGQAVAD GSDISDWDQA ANLIQAAVET YGGVDVLVNN
110 120 130 140 150
AGIVRDRMIA NTSEEEFDAV IAVHLKGHFA TMRHAASHWR GLSKAGKAPK
160 170 180 190 200
DIDARIINTS SGAGLQGSVG QGNYSAAKAG IAALTLVGAA EMRRYGVTVN
210 220 230 240 250
AIAPAARTRM TETVFAEMMA KPQEGFDAMA PENVSPLVVW LGSAESRDVT
260 270 280 290 300
GKVFEVEGGI IRVAEGWAHG PQVDKGVKWD PAELGPVVSD LLAKSRPPVP

VYGA
Length:304
Mass (Da):31,070
Last modified:July 5, 2004 - v3
Checksum:i9BDAE9F8F0D68D98
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR16338.1.
AL123456 Genomic DNA. Translation: CCP46370.1.
RefSeqiNP_218065.1. NC_000962.3.
WP_003900711.1. NZ_KK339374.1.

Genome annotation databases

EnsemblBacteriaiAIR16338; AIR16338; LH57_19355.
CCP46370; CCP46370; Rv3548c.
GeneIDi887452.
KEGGimtu:Rv3548c.
mtv:RVBD_3548c.
PATRICi18156504. VBIMycTub87468_3962.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP009480 Genomic DNA. Translation: AIR16338.1.
AL123456 Genomic DNA. Translation: CCP46370.1.
RefSeqiNP_218065.1. NC_000962.3.
WP_003900711.1. NZ_KK339374.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi83332.Rv3548c.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIR16338; AIR16338; LH57_19355.
CCP46370; CCP46370; Rv3548c.
GeneIDi887452.
KEGGimtu:Rv3548c.
mtv:RVBD_3548c.
PATRICi18156504. VBIMycTub87468_3962.

Phylogenomic databases

eggNOGiENOG4105KF3. Bacteria.
COG1028. LUCA.
OMAiVINDIGV.
OrthoDBiEOG6N3CR8.

Enzyme and pathway databases

BioCyciMTBRV:RV3548C-MONOMER.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 4 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
PROSITEiPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25618 / H37RvImported and H37RvImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. "Phylogenetic analysis of Mycobacterial species using whole genome sequences."
    Hazbon M.H., Riojas M.A., Damon A.M., Alalade R.O., Cantwell B.J., Monaco A., King S., Sohrabi A.
    Submitted (SEP-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27294 / TMC 102 / H37RvImported and H37RvImported.

Entry informationi

Entry nameiP71853_MYCTU
AccessioniPrimary (citable) accession number: P71853
Secondary accession number(s): F2GEQ8, I6X7M2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: July 5, 2004
Last modified: July 6, 2016
This is version 110 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.