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Protein

Putative HTH-type transcriptional regulator YwnA

Gene

ywnA

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi24 – 47H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU36630-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative HTH-type transcriptional regulator YwnA
Gene namesi
Name:ywnA
Ordered Locus Names:BSU36630
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003604201 – 133Putative HTH-type transcriptional regulator YwnAAdd BLAST133

Proteomic databases

PaxDbiP71036

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100019801

Structurei

Secondary structure

1133
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi5 – 17Combined sources13
Helixi24 – 31Combined sources8
Helixi35 – 47Combined sources13
Beta strandi50 – 52Combined sources3
Beta strandi55 – 59Combined sources5
Beta strandi61 – 64Combined sources4
Helixi71 – 78Combined sources8
Helixi96 – 120Combined sources25
Helixi125 – 128Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XD7X-ray2.30A2-133[»]
ProteinModelPortaliP71036
SMRiP71036
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP71036

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 130HTH rrf2-typePROSITE-ProRule annotationAdd BLAST130

Phylogenomic databases

eggNOGiENOG4108Z40 Bacteria
COG1959 LUCA
HOGENOMiHOG000249815
InParanoidiP71036
OMAiKMIYEAT
PhylomeDBiP71036

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000944 Tscrpt_reg_Rrf2-type
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR33221 PTHR33221, 1 hit
PfamiView protein in Pfam
PF02082 Rrf2, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS51197 HTH_RRF2_2, 1 hit

Sequencei

Sequence statusi: Complete.

P71036-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MINSRLAVAI HILSLISMDE KTSSEIIADS VNTNPVVVRR MISLLKKADI
60 70 80 90 100
LTSRAGVPGA SLKKDPADIS LLEVYRAVQK QEELFAVHEN PNPKCPVGKK
110 120 130
IQNALDETFE SVQRAMENEL ASKSLKDVMN HLF
Length:133
Mass (Da):14,711
Last modified:February 1, 1997 - v1
Checksum:i6F46176B2603BF70
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y08559 Genomic DNA Translation: CAA69860.1
AL009126 Genomic DNA Translation: CAB15680.1
PIRiD70063
RefSeqiNP_391544.1, NC_000964.3
WP_003227734.1, NZ_JNCM01000034.1

Genome annotation databases

EnsemblBacteriaiCAB15680; CAB15680; BSU36630
GeneIDi936952
KEGGibsu:BSU36630
PATRICifig|224308.179.peg.3964

Similar proteinsi

Entry informationi

Entry nameiYWNA_BACSU
AccessioniPrimary (citable) accession number: P71036
Secondary accession number(s): Q794Z7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome
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Main funding by: National Institutes of Health