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Protein

Putative tartrate transporter

Gene

ttuB

Organism
Agrobacterium vitis (Rhizobium vitis)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Protein family/group databases

TCDBi2.A.1.14.3. the major facilitator superfamily (mfs).

Names & Taxonomyi

Protein namesi
Recommended name:
Putative tartrate transporter
Gene namesi
Name:ttuB
Encoded oniPlasmid pTrAB30 Publication
OrganismiAgrobacterium vitis (Rhizobium vitis)
Taxonomic identifieri373 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacterium

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei34 – 54HelicalSequence analysisAdd BLAST21
Transmembranei64 – 84HelicalSequence analysisAdd BLAST21
Transmembranei99 – 119HelicalSequence analysisAdd BLAST21
Transmembranei130 – 150HelicalSequence analysisAdd BLAST21
Transmembranei156 – 176HelicalSequence analysisAdd BLAST21
Transmembranei194 – 214HelicalSequence analysisAdd BLAST21
Transmembranei259 – 279HelicalSequence analysisAdd BLAST21
Transmembranei292 – 312HelicalSequence analysisAdd BLAST21
Transmembranei336 – 356HelicalSequence analysisAdd BLAST21
Transmembranei367 – 387HelicalSequence analysisAdd BLAST21
Transmembranei414 – 434HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001213881 – 449Putative tartrate transporterAdd BLAST449

Expressioni

Inductioni

By tartrate.

Structurei

3D structure databases

ProteinModelPortaliP70786.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR004744. Dgal_transporter.
IPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
TIGRFAMsiTIGR00893. 2A0114. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P70786-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQAQEVRLLY LFREDGVVTN DLEARVLRKI TFRIVPFIML LYFIAFLDRV
60 70 80 90 100
NIGFAALTMN QDLGFSSTVF GIGAGIFFVG YFLFEVPSNL ILNKVGARIW
110 120 130 140 150
IARVMITWGI VSGLMAFVQG TTSFYILRFL LGVAEAGFFP GIILYLSFWF
160 170 180 190 200
PARRRAAVTA LFMAAAPLST VLGSPISGAL MEMHGLMGLA GWQWMFLIEA
210 220 230 240 250
APALILGVVV LFFLTDRPEK AKWLTEEERN WLVKTMNAEQ AGRGTASHSV
260 270 280 290 300
MAGLADIRVI ALALVYFGTS AGLYTLGIWA PQIIKQFGLS AIEVGFINAV
310 320 330 340 350
PGIFAVVAMV LWARHSDRTG ERTWHVVGAC LLAAAGLAFA AGATSVFMVL
360 370 380 390 400
IALTIVNVGI SCSKPPLWSM PTMFLSGPAA AAGIATINSI GNLGGFVGPS
410 420 430 440
MIGWIKDTTG SFTGGLYFVA GLLLISAILT LILARSSPKA VETRTANQH
Length:449
Mass (Da):48,395
Last modified:February 1, 1997 - v1
Checksum:i5E14E6381D97DF13
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U32375 Genomic DNA. Translation: AAB61622.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U32375 Genomic DNA. Translation: AAB61622.1.

3D structure databases

ProteinModelPortaliP70786.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

TCDBi2.A.1.14.3. the major facilitator superfamily (mfs).

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR004744. Dgal_transporter.
IPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
TIGRFAMsiTIGR00893. 2A0114. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiTUB3_AGRVI
AccessioniPrimary (citable) accession number: P70786
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Plasmid

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.