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Protein
Submitted name:

Nitrogen regulatory protein P-II 1

Gene

glnZ

Organism
Azospirillum brasilense
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei64 – 641ADP; via amide nitrogen and carbonyl oxygenCombined sources
Binding sitei64 – 641AMP; via amide nitrogen and carbonyl oxygenCombined sources
Binding sitei64 – 641ATP; via amide nitrogen and carbonyl oxygenCombined sources
Binding sitei112 – 1121ATP; via amide nitrogen and carbonyl oxygenCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi27 – 293ADPCombined sources
Nucleotide bindingi27 – 293AMPCombined sources
Nucleotide bindingi27 – 293ATPCombined sources
Nucleotide bindingi36 – 394ATPCombined sources
Nucleotide bindingi38 – 392ADPCombined sources
Nucleotide bindingi87 – 904ADPCombined sources
Nucleotide bindingi87 – 904ATPCombined sources
Nucleotide bindingi88 – 903AMPCombined sources
Nucleotide bindingi101 – 1033ADPCombined sources
Nucleotide bindingi101 – 1033ATPCombined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

ATP-bindingCombined sources, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Nitrogen regulatory protein P-II 1Imported
Submitted name:
PII-like protein PzImported
Submitted name:
PZ proteinImported
Submitted name:
Transcriptional regulatorImported
Gene namesi
Name:glnZImported
ORF Names:ABAZ39_13575Imported, AMK58_13670Imported
OrganismiAzospirillum brasilenseImported
Taxonomic identifieri192 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeAzospirillum
Proteomesi
  • UP000065707 Componenti: Chromosome
  • UP000027186 Componenti: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei51 – 511O-UMP-tyrosineUniRule annotation

Keywords - PTMi

PhosphoproteinUniRule annotation

Interactioni

Protein-protein interaction databases

MINTiMINT-3370679.
STRINGi1064539.AZOBR_10503.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3MHYX-ray1.40A/B/C1-112[»]
3O5TX-ray2.09B1-112[»]
4CNYX-ray1.20A1-112[»]
4CNZX-ray1.70A/B/C/D/E/F1-112[»]
4CO0X-ray1.40A/B1-112[»]
4CO1X-ray1.50A/B1-112[»]
4CO2X-ray1.80A/B1-112[»]
4CO3X-ray1.05A/B1-112[»]
4CO4X-ray1.50A/B/C1-112[»]
4CO5X-ray1.80A1-112[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the P(II) protein family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108YZA. Bacteria.
COG0347. LUCA.
KOiK04752.

Family and domain databases

Gene3Di3.30.70.120. 1 hit.
InterProiIPR002187. N-reg_PII.
IPR011322. N-reg_PII-like_a/b.
IPR015867. N-reg_PII/ATP_PRibTrfase_C.
IPR017918. N-reg_PII_CS.
IPR002332. N-reg_PII_urydylation_site.
[Graphical view]
PfamiPF00543. P-II. 1 hit.
[Graphical view]
PIRSFiPIRSF039144. GlnB. 1 hit.
PRINTSiPR00340. PIIGLNB.
SMARTiSM00938. P-II. 1 hit.
[Graphical view]
SUPFAMiSSF54913. SSF54913. 1 hit.
PROSITEiPS00638. PII_GLNB_CTER. 1 hit.
PS51343. PII_GLNB_DOM. 1 hit.
PS00496. PII_GLNB_UMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P70731-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLVMAIIKP FKLDEVREAL TSLGIQGLTV SEVKGFGRQK GQTEIYRGAE
60 70 80 90 100
YSVSFLPKVK VEVAVSDDQY EQVVEAIQKA ANTGRIGDGK IFVLDIAQAV
110
RIRTGETNTE AL
Length:112
Mass (Da):12,272
Last modified:February 1, 1997 - v1
Checksum:i69C040796572CA9D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF279917 Genomic DNA. Translation: AAG10012.1.
CP007793 Genomic DNA. Translation: AIB12990.1.
CP012914 Genomic DNA. Translation: ALJ36377.1.
X92496 Genomic DNA. Translation: CAA63238.1.
RefSeqiWP_035670687.1. NZ_CP012914.1.

Genome annotation databases

EnsemblBacteriaiAIB12990; AIB12990; ABAZ39_13575.
KEGGiabq:ABAZ39_13575.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF279917 Genomic DNA. Translation: AAG10012.1.
CP007793 Genomic DNA. Translation: AIB12990.1.
CP012914 Genomic DNA. Translation: ALJ36377.1.
X92496 Genomic DNA. Translation: CAA63238.1.
RefSeqiWP_035670687.1. NZ_CP012914.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3MHYX-ray1.40A/B/C1-112[»]
3O5TX-ray2.09B1-112[»]
4CNYX-ray1.20A1-112[»]
4CNZX-ray1.70A/B/C/D/E/F1-112[»]
4CO0X-ray1.40A/B1-112[»]
4CO1X-ray1.50A/B1-112[»]
4CO2X-ray1.80A/B1-112[»]
4CO3X-ray1.05A/B1-112[»]
4CO4X-ray1.50A/B/C1-112[»]
4CO5X-ray1.80A1-112[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-3370679.
STRINGi1064539.AZOBR_10503.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAIB12990; AIB12990; ABAZ39_13575.
KEGGiabq:ABAZ39_13575.

Phylogenomic databases

eggNOGiENOG4108YZA. Bacteria.
COG0347. LUCA.
KOiK04752.

Family and domain databases

Gene3Di3.30.70.120. 1 hit.
InterProiIPR002187. N-reg_PII.
IPR011322. N-reg_PII-like_a/b.
IPR015867. N-reg_PII/ATP_PRibTrfase_C.
IPR017918. N-reg_PII_CS.
IPR002332. N-reg_PII_urydylation_site.
[Graphical view]
PfamiPF00543. P-II. 1 hit.
[Graphical view]
PIRSFiPIRSF039144. GlnB. 1 hit.
PRINTSiPR00340. PIIGLNB.
SMARTiSM00938. P-II. 1 hit.
[Graphical view]
SUPFAMiSSF54913. SSF54913. 1 hit.
PROSITEiPS00638. PII_GLNB_CTER. 1 hit.
PS51343. PII_GLNB_DOM. 1 hit.
PS00496. PII_GLNB_UMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Coexistence of two structurally similar but functionally different PII proteins in Azospirillum brasilense."
    de Zamaroczy M., Paquelin A., Peltre G., Forchhammer K., Elmerich C.
    J. Bacteriol. 178:4143-4149(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SP7Imported.
  2. "Structural homologues P(II) and P(Z) of Azospirillum brasilense provide intracellular signalling for selective regulation of various nitrogen-dependent functions."
    de Zamaroczy M.
    Mol. Microbiol. 29:449-463(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SP7Imported.
  3. "ubiH-glnZ-aat-ftsK genes from Azospirillum brasilense."
    Chen S., Li J.
    Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. "A new P(II) protein structure identifies the 2-oxoglutarate binding site."
    Truan D., Huergo L.F., Chubatsu L.S., Merrick M., Li X.D., Winkler F.K.
    J. Mol. Biol. 400:531-539(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) IN COMPLEX WITH ATP.
  5. Cited for: X-RAY CRYSTALLOGRAPHY (2.09 ANGSTROMS) IN COMPLEX WITH ADP.
  6. "Complete Genome Sequence of the Model Rhizosphere Strain Azospirillum brasilense Az39, Successfully Applied in Agriculture."
    Rivera D., Revale S., Molina R., Gualpa J., Puente M., Maroniche G., Paris G., Baker D., Clavijo B., McLay K., Spaepen S., Perticari A., Vazquez M., Wisniewski-Dye F., Watkins C., Martinez-Abarca F., Vanderleyden J., Cassan F.
    Genome Announc. 2:e00683-14(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Az39Imported.
  7. "Structure and thermodynamics of effector molecule binding to the nitrogen signal transduction PII protein GlnZ from Azospirillum brasilense."
    Truan D., Bjelic S., Li X.D., Winkler F.K.
    J. Mol. Biol. 426:2783-2799(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.05 ANGSTROMS) IN COMPLEX WITH ADP; AMP AND ATP.
  8. Millard Andrew
    Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sp 7Imported.

Entry informationi

Entry nameiP70731_AZOBR
AccessioniPrimary (citable) accession number: P70731
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: May 11, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.