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Protein
Submitted name:

Cellular nucleic acid binding protein

Gene

CNBP

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Cellular nucleic acid binding proteinImported
Gene namesi
Name:CNBPImported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Structurei

3D structure databases

ProteinModelPortaliP70000.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 20CCHC-typeInterPro annotationAdd BLAST15
Domaini55 – 68CCHC-typeInterPro annotationAdd BLAST14
Domaini75 – 90CCHC-typeInterPro annotationAdd BLAST16
Domaini99 – 112CCHC-typeInterPro annotationAdd BLAST14
Domaini119 – 135CCHC-typeInterPro annotationAdd BLAST17
Domaini137 – 153CCHC-typeInterPro annotationAdd BLAST17
Domaini159 – 172CCHC-typeInterPro annotationAdd BLAST14

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

HOVERGENiHBG000397.
KOiK09250.

Family and domain databases

Gene3Di4.10.60.10. 7 hits.
InterProiView protein in InterPro
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF00098. zf-CCHC. 7 hits.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 7 hits.
SUPFAMiSSF57756. SSF57756. 4 hits.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 7 hits.

Sequencei

Sequence statusi: Complete.

P70000-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSNECFKCG RSGHWARECP TGGGRGRGGG RGRGRGGFSS SRGFQFISSS
60 70 80 90 100
LPDICYRCGE SGHLAKDCDL QEDACYNCGR GGHIAKDCKE PRKEREQCCY
110 120 130 140 150
NCGKPGHLAR DCEHADEQKC YSCGEFGHIQ KDCTKVKCYR CGDTGHVAIN
160 170
CSKTSEVNCY RCGESGHLAR ECTIEATA
Length:178
Mass (Da):19,388
Last modified:February 1, 1997 - v1
Checksum:iAF6D871E11FAC4AC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y07751 mRNA. Translation: CAA69031.1.
RefSeqiNP_001165425.1. NM_001171954.1.
UniGeneiXl.79428.
Xl.985.

Genome annotation databases

GeneIDi100335146.
KEGGixla:100335146.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y07751 mRNA. Translation: CAA69031.1.
RefSeqiNP_001165425.1. NM_001171954.1.
UniGeneiXl.79428.
Xl.985.

3D structure databases

ProteinModelPortaliP70000.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100335146.
KEGGixla:100335146.

Organism-specific databases

CTDi335839.

Phylogenomic databases

HOVERGENiHBG000397.
KOiK09250.

Family and domain databases

Gene3Di4.10.60.10. 7 hits.
InterProiView protein in InterPro
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF00098. zf-CCHC. 7 hits.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 7 hits.
SUPFAMiSSF57756. SSF57756. 4 hits.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 7 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiP70000_XENLA
AccessioniPrimary (citable) accession number: P70000
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: June 7, 2017
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.