P69471 (COAT_TRVPL) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names	Recommended name: Coat protein Alternative name(s): Capsid protein
Organism	Tobacco rattle virus (strain PLB)
Taxonomic identifier	33766 [NCBI]
Taxonomic lineage	Viruses › ssRNA viruses › ssRNA positive-strand viruses, no DNA stage › Virgaviridae › Tobravirus › Tobacco rattle virus
Virus host	Beta vulgaris (Sugar beet) [TaxID: 161934] Capsicum annuum (Bell pepper) [TaxID: 4072] Hyacinthus [TaxID: 82024] Narcissus pseudonarcissus (Daffodil) [TaxID: 39639] Nicotiana tabacum (Common tobacco) [TaxID: 4097] Solanum tuberosum (Potato) [TaxID: 4113] Spinacia oleracea (Spinach) [TaxID: 3562] Stellaria media (Common chickweed) (Alsine media) [TaxID: 13274] Tulipa [TaxID: 13305] Viola arvensis (European field pansy) (Field violet) [TaxID: 97415]

Protein attributes

Sequence length	209 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Subcellular location

Virion Potential.

Ontologies

Keywords
Cellular component	Virion
Molecular function	Capsid protein
Gene Ontology (GO)
Cellular_component	viral capsid Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 209	209	Coat protein		PRO_0000222505

Sequences

	Sequence		Length	Mass (Da)
	P69471 [UniParc]. Last modified August 13, 1987. Version 1. Checksum: FAA4CC252D4E95EB	FASTA	209	22,879
	10 20 30 40 50 60 MGDMYDEQFD KAGGPADLMD DSWVESTAWK DLLKKLHSVK FALQSGRDEI TGLLTTLSRQ 70 80 90 100 110 120 CPYSPYEQFP ERKVYFLLDS RANNALGVIQ NASAFKRRAD EKNAVAGVTN IPANPNTTVT 130 140 150 160 170 180 TNQGSTTTTK ANTSSTLEED LYTYYKFDDA STTFHKSLTS LENMQLKSYY RRNFEKNFGV 190 200 KFGSASTPAS GGSGATPPPA SGGAVRPNP

References

[1]	"Genome structure of tobacco rattle virus strain PLB: further evidence on the occurrence of RNA recombination among tobraviruses." Angenent G.C., Posthumus E., Brederode F.T.M., Bol J.F. Virology 171:271-274(1989) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	J04347 Genomic RNA. Translation: AAA47078.1.
PIR	VCBVCP. A04188.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR001337. TMV-like_coat. [Graphical view]
Pfam	PF00721. TMV_coat. 1 hit. [Graphical view]
SUPFAM	SSF47195. TMV_coat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

COAT_TRVPL

Accession

Primary (citable) accession number: P69471
Secondary accession number(s): P05071

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 13, 1987
Last sequence update:	August 13, 1987
Last modified:	April 3, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Viral Protein Annotation Program