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Protein

Citrate lyase acyl carrier protein

Gene

citD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Covalent carrier of the coenzyme of citrate lyase.

GO - Molecular functioni

  • prosthetic group binding Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:ACPSUB-MONOMER.
ECOL316407:JW0609-MONOMER.
MetaCyc:ACPSUB-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Citrate lyase acyl carrier protein
Alternative name(s):
Citrate lyase gamma chain
Gene namesi
Name:citD
Synonyms:ybdX
Ordered Locus Names:b0617, JW0609
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13543. citD.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002146951 – 98Citrate lyase acyl carrier proteinAdd BLAST98

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei14O-(phosphoribosyl dephospho-coenzyme A)serineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiP69330.
PRIDEiP69330.

Expressioni

Inductioni

Repressed by H-NS. Part of the citCDEFXG operon.1 Publication

Interactioni

Subunit structurei

Oligomer with a subunit composition of (alpha,beta, gamma)6.By similarity

Protein-protein interaction databases

BioGridi4259652. 9 interactors.
IntActiP69330. 3 interactors.
STRINGi511145.b0617.

Structurei

3D structure databases

ProteinModelPortaliP69330.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CitD family.Curated

Phylogenomic databases

eggNOGiENOG4105XGS. Bacteria.
COG3052. LUCA.
HOGENOMiHOG000040480.
InParanoidiP69330.
KOiK01646.
OMAiYNWKEID.
PhylomeDBiP69330.

Family and domain databases

HAMAPiMF_00805. CitD. 1 hit.
InterProiIPR006495. CitD.
IPR023439. Mal_deCO2ase/Cit_lyase_ACP.
[Graphical view]
PfamiPF06857. ACP. 1 hit.
[Graphical view]
PIRSFiPIRSF002736. Citrt_lyas_gamma. 1 hit.
ProDomiPD015389. CitD. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR01608. citD. 1 hit.

Sequencei

Sequence statusi: Complete.

P69330-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKINQPAVAG TLESGDVMIR IAPLDTQDID LQINSSVEKQ FGDAIRTTIL
60 70 80 90
DVLARYNVRG VQLNVDDKGA LDCILRARLE ALLARASGIP ALPWEDCQ
Length:98
Mass (Da):10,689
Last modified:February 15, 2005 - v1
Checksum:i5932A2109978398A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti93 – 98PWEDCQ → HGRIANDFRFAATT (PubMed:8905232).Curated6

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U46667 Genomic DNA. Translation: AAC28949.1.
U82598 Genomic DNA. Translation: AAB40817.1.
U00096 Genomic DNA. Translation: AAC73718.1.
AP009048 Genomic DNA. Translation: BAA35253.1.
PIRiG64795.
RefSeqiNP_415150.1. NC_000913.3.
WP_000700703.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73718; AAC73718; b0617.
BAA35253; BAA35253; BAA35253.
GeneIDi945415.
KEGGiecj:JW0609.
eco:b0617.
PATRICi32116414. VBIEscCol129921_0647.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U46667 Genomic DNA. Translation: AAC28949.1.
U82598 Genomic DNA. Translation: AAB40817.1.
U00096 Genomic DNA. Translation: AAC73718.1.
AP009048 Genomic DNA. Translation: BAA35253.1.
PIRiG64795.
RefSeqiNP_415150.1. NC_000913.3.
WP_000700703.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP69330.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259652. 9 interactors.
IntActiP69330. 3 interactors.
STRINGi511145.b0617.

Proteomic databases

PaxDbiP69330.
PRIDEiP69330.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73718; AAC73718; b0617.
BAA35253; BAA35253; BAA35253.
GeneIDi945415.
KEGGiecj:JW0609.
eco:b0617.
PATRICi32116414. VBIEscCol129921_0647.

Organism-specific databases

EchoBASEiEB3313.
EcoGeneiEG13543. citD.

Phylogenomic databases

eggNOGiENOG4105XGS. Bacteria.
COG3052. LUCA.
HOGENOMiHOG000040480.
InParanoidiP69330.
KOiK01646.
OMAiYNWKEID.
PhylomeDBiP69330.

Enzyme and pathway databases

BioCyciEcoCyc:ACPSUB-MONOMER.
ECOL316407:JW0609-MONOMER.
MetaCyc:ACPSUB-MONOMER.

Miscellaneous databases

PROiP69330.

Family and domain databases

HAMAPiMF_00805. CitD. 1 hit.
InterProiIPR006495. CitD.
IPR023439. Mal_deCO2ase/Cit_lyase_ACP.
[Graphical view]
PfamiPF06857. ACP. 1 hit.
[Graphical view]
PIRSFiPIRSF002736. Citrt_lyas_gamma. 1 hit.
ProDomiPD015389. CitD. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR01608. citD. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCITD_ECOLI
AccessioniPrimary (citable) accession number: P69330
Secondary accession number(s): O54336, P77618
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 15, 2005
Last sequence update: February 15, 2005
Last modified: November 2, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.